Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 RPS29P10-201ENST00000439197 166 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN9P43378 RPL7P33-201ENST00000444159 742 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 AC008379.1-201ENST00000463655 464 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 UBA52P7-201ENST00000486088 380 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 AL049874.2-201ENST00000492636 288 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 GTF2F2P1-201ENST00000511083 675 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 RNU5A-7P-201ENST00000515979 116 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 RNU6-415P-201ENST00000516252 97 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN9P43378 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN9P43378 GVINP1-202ENST00000531871 7271 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.44□□□□□ -1.54
PTPN9P43378 AC068993.1-201ENST00000546724 589 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.44□□□□□ -1.54
PTPN9P43378 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.44□□□□□ -1.54
PTPN9P43378 EIF1P5-201ENST00000585002 234 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.44□□□□□ -1.54
PTPN9P43378 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 AC026979.4-201ENST00000606555 645 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 AC090912.3-201ENST00000609775 533 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.44□□□□□ -1.54
PTPN9P43378 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.44□□□□□ -1.54
PTPN9P43378 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.44□□□□□ -1.54
PTPN9P43378 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.44□□□□□ -1.54
PTPN9P43378 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 TMEM30CP-203ENST00000637814 1035 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 OR52B5P-202ENST00000641118 1110 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 AC002525.1-201ENST00000624392 1622 ntBASIC5.44□□□□□ -1.54
PTPN9P43378 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTPN9P43378 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PTPN9P43378 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN9P43378 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN9P43378 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN9P43378 AC092376.2-201ENST00000622621 4116 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN9P43378 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN9P43378 RNA5SP223-201ENST00000365174 120 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 HMGB1P10-201ENST00000395823 563 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC234781.4-201ENST00000419384 244 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN9P43378 AL096829.2-201ENST00000446582 742 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 RPL5P13-201ENST00000462840 709 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.43□□□□□ -1.54
PTPN9P43378 RPS4XP1-201ENST00000482189 787 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC116562.1-201ENST00000485355 781 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC097173.1-201ENST00000505862 819 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTPN9P43378 AC108120.2-201ENST00000512973 294 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 MTCYBP19-201ENST00000517463 1124 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC024940.3-201ENST00000538551 316 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.43□□□□□ -1.54
PTPN9P43378 AL359219.2-201ENST00000555184 348 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.43□□□□□ -1.54
PTPN9P43378 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 AC095055.1-201ENST00000603472 1113 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AL158050.2-201ENST00000605336 568 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC073137.1-201ENST00000605636 634 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AL512329.2-201ENST00000607350 548 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC008115.4-201ENST00000619780 775 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 AC007275.1-201ENST00000621243 671 ntBASIC5.43□□□□□ -1.54
PTPN9P43378 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PTPN9P43378 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.43□□□□□ -1.54
PTPN9P43378 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN9P43378 TRIM51GP-201ENST00000534741 1350 ntBASIC5.42□□□□□ -1.54
PTPN9P43378 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN9P43378 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
PTPN9P43378 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN9P43378 AC011493.1-201ENST00000596753 1632 ntBASIC5.42□□□□□ -1.54
PTPN9P43378 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN9P43378 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.42□□□□□ -1.54
PTPN9P43378 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN9P43378 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN9P43378 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTPN9P43378 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTPN9P43378 RNU6-252P-201ENST00000363232 107 ntBASIC5.42□□□□□ -1.54
PTPN9P43378 AC007618.1-201ENST00000366455 732 ntBASIC5.42□□□□□ -1.54
PTPN9P43378 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
PTPN9P43378 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.42□□□□□ -1.54
PTPN9P43378 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.42□□□□□ -1.54
PTPN9P43378 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms