Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AP003400.3-201ENST00000624904 346 ntBASIC5.1□□□□□ -1.59
CDH3P22223 AL672167.1-204ENST00000641875 3017 ntBASIC5.1□□□□□ -1.59
CDH3P22223 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.1□□□□□ -1.59
CDH3P22223 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CDH3P22223 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH3P22223 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CDH3P22223 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.09□□□□□ -1.59
CDH3P22223 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 RNU4-39P-201ENST00000362455 127 ntBASIC5.09□□□□□ -1.59
CDH3P22223 SNORA17.1-201ENST00000362945 126 ntBASIC5.09□□□□□ -1.59
CDH3P22223 SNORA27.3-201ENST00000364937 134 ntBASIC5.09□□□□□ -1.59
CDH3P22223 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 MIR600-201ENST00000385007 98 ntBASIC5.09□□□□□ -1.59
CDH3P22223 RN7SKP213-201ENST00000410746 298 ntBASIC5.09□□□□□ -1.59
CDH3P22223 COX5BP7-201ENST00000414780 274 ntBASIC5.09□□□□□ -1.59
CDH3P22223 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH3P22223 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH3P22223 AC005033.1-201ENST00000428904 813 ntBASIC5.09□□□□□ -1.59
CDH3P22223 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH3P22223 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH3P22223 PTMAP6-201ENST00000439110 327 ntBASIC5.09□□□□□ -1.59
CDH3P22223 PRPF38AP1-201ENST00000451976 933 ntBASIC5.09□□□□□ -1.59
CDH3P22223 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH3P22223 RPSAP50-201ENST00000481955 852 ntBASIC5.09□□□□□ -1.59
CDH3P22223 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.09□□□□□ -1.59
CDH3P22223 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH3P22223 SNRPCP2-201ENST00000504370 475 ntBASIC5.09□□□□□ -1.59
CDH3P22223 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH3P22223 BTG4P1-201ENST00000510421 183 ntBASIC5.09□□□□□ -1.59
CDH3P22223 EIF3KP3-201ENST00000514461 639 ntBASIC5.09□□□□□ -1.59
CDH3P22223 HMGN1P9-201ENST00000515212 298 ntBASIC5.09□□□□□ -1.59
CDH3P22223 RNU6-319P-201ENST00000516025 108 ntBASIC5.09□□□□□ -1.59
CDH3P22223 snoU109.6-201ENST00000516831 118 ntBASIC5.09□□□□□ -1.59
CDH3P22223 RNA5SP373-201ENST00000517271 95 ntBASIC5.09□□□□□ -1.59
CDH3P22223 AC024940.3-201ENST00000538551 316 ntBASIC5.09□□□□□ -1.59
CDH3P22223 HMGN2P6-201ENST00000551091 273 ntBASIC5.09□□□□□ -1.59
CDH3P22223 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.09□□□□□ -1.59
CDH3P22223 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 AC095055.1-201ENST00000603472 1113 ntBASIC5.09□□□□□ -1.59
CDH3P22223 HMGB1P51-201ENST00000605166 638 ntBASIC5.09□□□□□ -1.59
CDH3P22223 AC005972.3-201ENST00000606304 481 ntBASIC5.09□□□□□ -1.59
CDH3P22223 AC009163.6-201ENST00000612367 342 ntBASIC5.09□□□□□ -1.59
CDH3P22223 AC037198.3-201ENST00000616754 526 ntBASIC5.09□□□□□ -1.59
CDH3P22223 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CDH3P22223 AC022106.2-201ENST00000620114 757 ntBASIC5.09□□□□□ -1.59
CDH3P22223 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.09□□□□□ -1.59
CDH3P22223 AC006453.5-201ENST00000636451 619 ntBASIC5.09□□□□□ -1.59
CDH3P22223 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.09□□□□□ -1.6
CDH3P22223 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.09□□□□□ -1.6
CDH3P22223 AC092747.4-201ENST00000620519 1861 ntBASIC5.09□□□□□ -1.6
CDH3P22223 AC100778.3-201ENST00000580060 1750 ntBASIC5.09□□□□□ -1.6
CDH3P22223 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.09□□□□□ -1.6
CDH3P22223 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH3P22223 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CDH3P22223 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 AC017079.1-201ENST00000333650 415 ntBASIC5.08□□□□□ -1.6
CDH3P22223 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 U8.4-201ENST00000363626 134 ntBASIC5.08□□□□□ -1.6
CDH3P22223 MIR421-201ENST00000365696 85 ntBASIC5.08□□□□□ -1.6
CDH3P22223 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CDH3P22223 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CDH3P22223 AL512430.2-201ENST00000406786 339 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.08□□□□□ -1.6
CDH3P22223 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.08□□□□□ -1.6
CDH3P22223 MTND4LP14-201ENST00000429447 288 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AL590762.3-201ENST00000436372 640 ntBASIC5.08□□□□□ -1.6
CDH3P22223 MTND6P18-201ENST00000439477 513 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC079168.1-201ENST00000458741 345 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC009127.1-201ENST00000467090 155 ntBASIC5.08□□□□□ -1.6
CDH3P22223 AC022133.1-201ENST00000490961 571 ntBASIC5.08□□□□□ -1.6
CDH3P22223 PCNAP1-201ENST00000505363 709 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms