Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.93□□□□□ -1.62
TO15178 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.93□□□□□ -1.62
TO15178 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
TO15178 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
TO15178 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TO15178 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TO15178 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 GCNT6-201ENST00000379591 934 ntBASIC4.93□□□□□ -1.62
TO15178 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
TO15178 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
TO15178 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.93□□□□□ -1.62
TO15178 AL034374.1-201ENST00000406329 351 ntBASIC4.93□□□□□ -1.62
TO15178 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
TO15178 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.93□□□□□ -1.62
TO15178 RN7SKP59-201ENST00000410520 314 ntBASIC4.93□□□□□ -1.62
TO15178 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.93□□□□□ -1.62
TO15178 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
TO15178 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.93□□□□□ -1.62
TO15178 AC093655.2-201ENST00000425735 631 ntBASIC4.93□□□□□ -1.62
TO15178 BX119904.1-201ENST00000432026 348 ntBASIC4.93□□□□□ -1.62
TO15178 CFL1P1-202ENST00000432948 411 ntBASIC4.93□□□□□ -1.62
TO15178 MTND6P18-201ENST00000439477 513 ntBASIC4.93□□□□□ -1.62
TO15178 ZNF736P11Y-201ENST00000442535 1213 ntBASIC4.93□□□□□ -1.62
TO15178 ZNF736P12Y-201ENST00000443152 1243 ntBASIC4.93□□□□□ -1.62
TO15178 MTCYBP21-201ENST00000443300 1113 ntBASIC4.93□□□□□ -1.62
TO15178 CLIC4P1-201ENST00000453177 535 ntBASIC4.93□□□□□ -1.62
TO15178 ZNF736P4Y-201ENST00000454995 1243 ntBASIC4.93□□□□□ -1.62
TO15178 CBX1P5-201ENST00000475330 559 ntBASIC4.93□□□□□ -1.62
TO15178 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.93□□□□□ -1.62
TO15178 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 RPL7P40-201ENST00000481703 745 ntBASIC4.93□□□□□ -1.62
TO15178 RN7SL205P-201ENST00000490174 284 ntBASIC4.93□□□□□ -1.62
TO15178 IGBP1P4-201ENST00000503202 879 ntBASIC4.93□□□□□ -1.62
TO15178 HSPD1P11-201ENST00000508643 1702 ntBASIC4.93□□□□□ -1.62
TO15178 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.93□□□□□ -1.62
TO15178 HMGN1P9-201ENST00000515212 298 ntBASIC4.93□□□□□ -1.62
TO15178 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.93□□□□□ -1.62
TO15178 CDC42P3-201ENST00000518493 633 ntBASIC4.93□□□□□ -1.62
TO15178 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.93□□□□□ -1.62
TO15178 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.93□□□□□ -1.62
TO15178 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.93□□□□□ -1.62
TO15178 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.93□□□□□ -1.62
TO15178 AL049779.2-201ENST00000553847 315 ntBASIC4.93□□□□□ -1.62
TO15178 AL390726.5-202ENST00000564800 256 ntBASIC4.93□□□□□ -1.62
TO15178 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.93□□□□□ -1.62
TO15178 MIR3936-201ENST00000584304 110 ntBASIC4.93□□□□□ -1.62
TO15178 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.93□□□□□ -1.62
TO15178 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.93□□□□□ -1.62
TO15178 AC136428.4-201ENST00000634254 1155 ntBASIC4.93□□□□□ -1.62
TO15178 OR55B1P-203ENST00000641518 2602 ntBASIC4.93□□□□□ -1.62
TO15178 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
TO15178 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 AP000756.2-201ENST00000624168 2567 ntBASIC4.93□□□□□ -1.62
TO15178 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
TO15178 AL034549.2-201ENST00000618285 3373 ntBASIC4.93□□□□□ -1.62
TO15178 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.92□□□□□ -1.62
TO15178 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 CASC19-284ENST00000642142 1868 ntBASIC4.92□□□□□ -1.62
TO15178 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TO15178 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TO15178 MTCO1P4-201ENST00000520516 1409 ntBASIC4.92□□□□□ -1.62
TO15178 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.92□□□□□ -1.62
TO15178 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TO15178 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.92□□□□□ -1.62
TO15178 HMGB1P10-201ENST00000395823 563 ntBASIC4.92□□□□□ -1.62
TO15178 OR4K12P-201ENST00000406538 961 ntBASIC4.92□□□□□ -1.62
TO15178 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.92□□□□□ -1.62
TO15178 GPS2P1-201ENST00000411761 986 ntBASIC4.92□□□□□ -1.62
TO15178 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.92□□□□□ -1.62
TO15178 FAM96AP1-201ENST00000430879 482 ntBASIC4.92□□□□□ -1.62
TO15178 RPL7L1P9-201ENST00000431298 745 ntBASIC4.92□□□□□ -1.62
TO15178 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TO15178 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC4.92□□□□□ -1.62
TO15178 CACYBPP1-201ENST00000438592 684 ntBASIC4.92□□□□□ -1.62
TO15178 RNFT1P2-201ENST00000443064 757 ntBASIC4.92□□□□□ -1.62
TO15178 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.92□□□□□ -1.62
TO15178 AC090804.1-201ENST00000448870 490 ntBASIC4.92□□□□□ -1.62
TO15178 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.92□□□□□ -1.62
TO15178 CBX1P2-201ENST00000453841 458 ntBASIC4.92□□□□□ -1.62
TO15178 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.92□□□□□ -1.62
TO15178 RPL7P39-201ENST00000481157 744 ntBASIC4.92□□□□□ -1.62
TO15178 AC022133.1-201ENST00000490961 571 ntBASIC4.92□□□□□ -1.62
TO15178 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.92□□□□□ -1.62
TO15178 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms