Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SUN3-208ENST00000453192 801 ntTSL 5 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 RNU6-956P-201ENST00000458868 103 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 XACT-201ENST00000468762 497 ntTSL 5 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC011979.1-201ENST00000472300 483 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC116347.2-201ENST00000514912 523 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 MTHFD2P4-201ENST00000515074 1025 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AP000873.5-201ENST00000533906 236 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 NMNAT1P5-201ENST00000559657 841 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC127024.5-201ENST00000580085 462 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AP005262.1-201ENST00000582646 997 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC090181.2-201ENST00000602975 672 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 SDR42E1P1-201ENST00000611327 477 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AL592148.2-201ENST00000612210 372 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC013476.2-201ENST00000614456 459 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AL034408.1-201ENST00000637712 664 ntBASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 SLC36A4-206ENST00000529184 1917 ntTSL 2 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
CSB-PGBD3P0DP91 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC138393.1-206ENST00000540997 1886 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 RNU4-7P-201ENST00000364758 141 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AL050335.1-201ENST00000396909 869 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 RPS3AP2-201ENST00000407190 754 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC017078.1-201ENST00000416146 368 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 OR5AW1P-201ENST00000426334 1006 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CDY14P-201ENST00000431260 1014 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 SUMO2P3-201ENST00000438311 288 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CDY23P-201ENST00000451661 1014 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC091959.2-201ENST00000477363 321 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 OR5H5P-201ENST00000503164 928 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 KRT19P6-201ENST00000510983 209 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 FABP5P5-201ENST00000515537 406 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AP001317.1-201ENST00000531194 960 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC084757.1-201ENST00000559987 490 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 NPM1P47-201ENST00000560843 856 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 MTND1P15-201ENST00000579262 949 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 LAPTM4BP2-201ENST00000604542 446 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC091946.2-201ENST00000606105 291 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AL451074.6-201ENST00000608512 729 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 Z99129.1-201ENST00000612510 255 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 USP46-202ENST00000451218 4622 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CTNNA1P1-201ENST00000515849 2728 ntBASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC8.2□□□□□ -1.1
CSB-PGBD3P0DP91 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
CSB-PGBD3P0DP91 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms