Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AC006272.2-201ENST00000594725 163 ntBASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 AC100827.5-201ENST00000615883 426 ntBASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 DHX9P1-201ENST00000436565 3076 ntBASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 CASC19-281ENST00000642118 1554 ntBASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 TCP1P3-201ENST00000414406 1498 ntBASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.69□□□□□ -1.66
LRTM1Q9HBL6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 MIR765-201ENST00000390226 114 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AL589647.1-201ENST00000402485 466 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AL021331.1-201ENST00000402817 582 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 TBCAP2-201ENST00000416175 326 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 E2F6P2-201ENST00000420708 748 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC005033.1-201ENST00000428904 813 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 RPS4XP12-201ENST00000461747 709 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC116562.1-201ENST00000485355 781 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 RNU6-709P-201ENST00000517257 104 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC009163.6-201ENST00000612367 342 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 AC010435.1-201ENST00000623353 1177 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 MAPK10-320ENST00000641462 6696 ntBASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
LRTM1Q9HBL6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC126323.6-202ENST00000568092 3511 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 RNA5SP428-201ENST00000365129 132 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 RHOT1P3-201ENST00000436571 331 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC004938.1-201ENST00000438468 308 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 RN7SL319P-201ENST00000480656 221 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AP000676.2-201ENST00000529711 301 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC092490.3-201ENST00000545370 572 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC068993.1-201ENST00000546724 589 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 MIR4691-201ENST00000583764 85 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 RNU6-84P-201ENST00000607737 102 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AL356752.1-201ENST00000615844 593 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AL353662.3-201ENST00000625131 237 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 AC006453.5-201ENST00000636451 619 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 SAMMSON-213ENST00000641336 1521 ntBASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
LRTM1Q9HBL6 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.66□□□□□ -1.66
LRTM1Q9HBL6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 200.9 ms