Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC025181.1-201ENST00000477507 416 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 OR52A4P-202ENST00000481634 799 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 NIP7P2-201ENST00000485801 544 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AL136038.1-201ENST00000497246 351 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 RPEP1-201ENST00000504507 658 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 HAUS1P1-201ENST00000505275 832 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 BX510359.5-201ENST00000515651 304 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 RNU6-889P-201ENST00000517189 103 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 HMGB1P19-201ENST00000517578 577 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 NPM1P35-201ENST00000533043 868 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC004477.3-201ENST00000614061 590 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AL162233.1-201ENST00000620014 944 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC026124.2-201ENST00000621847 656 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC107068.1-201ENST00000563286 4218 ntBASIC3.42□□□□□ -1.86
SYCNQ0VAF6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SYCNQ0VAF6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 RNA5SP90-201ENST00000364801 99 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AL035079.1-201ENST00000405210 287 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 SNORA11.5-201ENST00000408163 128 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AL390774.1-201ENST00000411924 246 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 OR6K4P-201ENST00000423179 955 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 FAM204CP-201ENST00000424489 642 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 CR848007.2-201ENST00000424918 787 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC079807.1-201ENST00000429993 481 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC009238.2-201ENST00000431026 355 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 ZDHHC20P1-204ENST00000435787 423 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 SPRYD7P1-201ENST00000443861 570 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC004980.3-201ENST00000447046 365 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC022431.1-201ENST00000450941 438 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 OR2AO1P-201ENST00000476497 403 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC015864.1-201ENST00000496512 544 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 ENPP7P11-201ENST00000505915 627 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC040958.1-201ENST00000561102 201 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 MIR3614-201ENST00000581261 86 ntBASIC3.41□□□□□ -1.86
SYCNQ0VAF6 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC3.41□□□□□ -1.86
SYCNQ0VAF6 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms