Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.25□□□□□ -1.57
PCNAP12004 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.25□□□□□ -1.57
PCNAP12004 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.25□□□□□ -1.57
PCNAP12004 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCNAP12004 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 ATP5HP3-201ENST00000396994 486 ntBASIC5.25□□□□□ -1.57
PCNAP12004 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
PCNAP12004 TATDN1P1-201ENST00000414123 891 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AL596448.1-201ENST00000415024 392 ntBASIC5.25□□□□□ -1.57
PCNAP12004 OR13Z1P-201ENST00000416141 834 ntBASIC5.25□□□□□ -1.57
PCNAP12004 Z93019.1-201ENST00000416450 973 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 AKR1B10P1-201ENST00000425765 942 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AL160175.1-201ENST00000428124 247 ntBASIC5.25□□□□□ -1.57
PCNAP12004 FO393414.1-201ENST00000428697 1184 ntBASIC5.25□□□□□ -1.57
PCNAP12004 TMX2P1-201ENST00000436507 708 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AC019185.1-201ENST00000442718 389 ntBASIC5.25□□□□□ -1.57
PCNAP12004 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 HMGN1P36-201ENST00000446623 298 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 HMGB1P5-202ENST00000451497 985 ntBASIC5.25□□□□□ -1.57
PCNAP12004 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCNAP12004 CDH12P2-201ENST00000504393 298 ntBASIC5.25□□□□□ -1.57
PCNAP12004 MTND6P2-201ENST00000512226 524 ntBASIC5.25□□□□□ -1.57
PCNAP12004 RNU6-1308P-201ENST00000516817 103 ntBASIC5.25□□□□□ -1.57
PCNAP12004 SCARNA16.4-201ENST00000516956 187 ntBASIC5.25□□□□□ -1.57
PCNAP12004 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 HIGD1AP18-201ENST00000520730 278 ntBASIC5.25□□□□□ -1.57
PCNAP12004 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 OR8G3P-201ENST00000533406 921 ntBASIC5.25□□□□□ -1.57
PCNAP12004 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 AC087888.1-201ENST00000550884 1254 ntBASIC5.25□□□□□ -1.57
PCNAP12004 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
PCNAP12004 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 AC090666.1-201ENST00000578241 445 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 MIR4472-2-201ENST00000582069 67 ntBASIC5.25□□□□□ -1.57
PCNAP12004 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 MIR4760-201ENST00000585040 80 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.25□□□□□ -1.57
PCNAP12004 RN7SL787P-201ENST00000613000 284 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AC132068.1-201ENST00000623805 459 ntBASIC5.25□□□□□ -1.57
PCNAP12004 FRG1EP-201ENST00000634469 770 ntBASIC5.25□□□□□ -1.57
PCNAP12004 AL445984.1-201ENST00000637834 659 ntBASIC5.25□□□□□ -1.57
PCNAP12004 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 AC003973.3-201ENST00000624863 2822 ntBASIC5.25□□□□□ -1.57
PCNAP12004 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PCNAP12004 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
PCNAP12004 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCNAP12004 LINC01109-201ENST00000603837 3081 ntBASIC5.25□□□□□ -1.57
PCNAP12004 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 RN7SKP224-201ENST00000364140 325 ntBASIC5.24□□□□□ -1.57
PCNAP12004 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCNAP12004 SNORA68.2-201ENST00000391263 128 ntBASIC5.24□□□□□ -1.57
PCNAP12004 RPL22P22-201ENST00000395439 379 ntBASIC5.24□□□□□ -1.57
PCNAP12004 HMGB3P7-201ENST00000400214 611 ntBASIC5.24□□□□□ -1.57
PCNAP12004 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 NPM1P40-201ENST00000412758 733 ntBASIC5.24□□□□□ -1.57
PCNAP12004 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 AC006994.1-201ENST00000438212 839 ntBASIC5.24□□□□□ -1.57
PCNAP12004 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.24□□□□□ -1.57
PCNAP12004 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 AC107398.1-201ENST00000486904 505 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.24□□□□□ -1.57
PCNAP12004 AC133963.2-201ENST00000513686 578 ntBASIC5.24□□□□□ -1.57
PCNAP12004 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.24□□□□□ -1.57
PCNAP12004 SCARNA1-201ENST00000517138 166 ntBASIC5.24□□□□□ -1.57
PCNAP12004 NRBF2P4-201ENST00000520874 850 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms