Protein–RNA interactions for Protein: Q9UPZ3

HPS5, Hermansky-Pudlak syndrome 5 protein, humanhuman

Predictions only

Length 1,129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5Q9UPZ3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC8.4□□□□□ -1.07
HPS5Q9UPZ3 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
HPS5Q9UPZ3 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
HPS5Q9UPZ3 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 TRIM5-202ENST00000380034 2991 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 FAM186A-201ENST00000327337 7127 ntAPPRIS P2 TSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 NXF2B-204ENST00000618302 2884 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 EPB41-201ENST00000343067 5956 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC007383.1-201ENST00000445875 636 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 OR51P1P-201ENST00000447547 942 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 RPL23AP20-201ENST00000447965 421 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 CACYBPP2-201ENST00000453625 678 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 RPSAP7-201ENST00000456871 885 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SNX5P1-201ENST00000505757 1041 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AP003122.3-201ENST00000526316 255 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 NIFKP8-201ENST00000560500 874 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 ATP5F1P7-201ENST00000567330 760 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC009977.1-201ENST00000586015 570 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC112191.3-201ENST00000604371 277 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC018695.5-201ENST00000605872 315 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC078909.2-201ENST00000620584 398 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC022400.9-201ENST00000623633 273 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC140479.4-205ENST00000636339 820 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 CACNB4-219ENST00000636108 1698 ntTSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 LINC02347-201ENST00000397346 2458 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 AC034111.1-201ENST00000562143 3770 ntBASIC8.39□□□□□ -1.07
HPS5Q9UPZ3 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 FARSBP1-201ENST00000435808 1778 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 RN7SKP191-201ENST00000364713 306 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 SNORD65-201ENST00000391079 73 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 RN7SKP232-201ENST00000410170 290 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 RNA5SP155-201ENST00000411154 129 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 RN7SKP85-201ENST00000411349 318 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 GAPDHP49-201ENST00000421421 961 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 YWHAEP5-201ENST00000431545 765 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 HMGB3P12-201ENST00000438745 556 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AL139156.3-201ENST00000454802 394 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 IGHVIII-26-1-201ENST00000520387 250 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC022878.1-201ENST00000530684 149 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 RPS4XP21-201ENST00000603814 750 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC113194.1-201ENST00000606037 500 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC091905.1-201ENST00000624400 311 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 AC093591.3-201ENST00000634516 308 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 CASC19-232ENST00000641480 1244 ntBASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
HPS5Q9UPZ3 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms