Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN9P43378 AC093084.1-201ENST00000424233 687 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 RPL7L1P9-201ENST00000431298 745 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AL512661.1-201ENST00000434586 1253 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AL161722.2-201ENST00000434731 981 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 RNFT1P2-201ENST00000443064 757 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 OR52E3P-201ENST00000452083 936 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 RPL32P14-201ENST00000463196 378 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 EIF3LP3-201ENST00000495197 822 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC093801.2-201ENST00000503966 1050 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 PGAM1P13-201ENST00000507497 754 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC121161.1-201ENST00000510606 652 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN9P43378 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.49□□□□□ -1.53
PTPN9P43378 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN9P43378 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AL049779.2-201ENST00000553847 315 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN9P43378 RN7SL708P-201ENST00000580952 299 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 CBX3P2-202ENST00000583365 535 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.49□□□□□ -1.53
PTPN9P43378 AC010503.3-201ENST00000594355 540 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC245884.10-201ENST00000597355 337 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC079880.2-201ENST00000603790 1213 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 AC016597.2-201ENST00000613256 341 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 AC105105.5-201ENST00000622635 1294 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.49□□□□□ -1.53
PTPN9P43378 CYP4F35P-202ENST00000636121 390 ntBASIC5.49□□□□□ -1.53
PTPN9P43378 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PTPN9P43378 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PTPN9P43378 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PTPN9P43378 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 U3.3-201ENST00000362986 216 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 AL672167.2-201ENST00000377164 879 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 RNU6-31P-201ENST00000384388 108 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 NUDT19P3-201ENST00000404698 555 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC069282.1-201ENST00000411911 526 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 TATDN1P1-201ENST00000414123 891 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 AL158050.1-201ENST00000416077 457 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 VN1R37P-201ENST00000419096 748 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 SFR1P2-201ENST00000421841 730 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 AC108075.1-201ENST00000424692 529 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 AL160175.1-201ENST00000428124 247 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 GAPDHP58-201ENST00000438477 1006 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 AL157827.1-201ENST00000447622 132 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 HMGN1P5-201ENST00000448591 263 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 RN7SL189P-201ENST00000468631 289 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 RPS4XP20-201ENST00000505751 772 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 MTCO3P27-201ENST00000514397 196 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 AC040958.1-201ENST00000561102 201 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 AC106730.2-201ENST00000566641 540 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 MIR3176-201ENST00000582210 90 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.48□□□□□ -1.53
PTPN9P43378 AC109309.2-201ENST00000612597 332 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 AL158062.1-201ENST00000619632 745 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC091932.2-201ENST00000623014 291 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
PTPN9P43378 RPL23AP61-201ENST00000623642 466 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 AC093875.1-201ENST00000623688 504 ntBASIC5.48□□□□□ -1.53
PTPN9P43378 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.48□□□□□ -1.53
PTPN9P43378 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.48□□□□□ -1.53
PTPN9P43378 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PTPN9P43378 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
PTPN9P43378 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms