Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC008833.1-201ENST00000611633 691 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 uc_338.18-201ENST00000615451 175 ntBASIC5.19□□□□□ -1.58
TNFSF9P41273 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.19□□□□□ -1.58
TNFSF9P41273 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF9P41273 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
TNFSF9P41273 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF9P41273 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF9P41273 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF9P41273 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF9P41273 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AL358178.1-201ENST00000407698 397 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 OR51B3P-201ENST00000412287 913 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 BX510359.2-201ENST00000417920 305 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF9P41273 OR5M12P-201ENST00000423388 929 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
TNFSF9P41273 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF9P41273 RPS29P33-201ENST00000456717 146 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 RPL12P20-201ENST00000475538 479 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AC090686.1-201ENST00000481577 749 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 DEFB109A-201ENST00000482450 265 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AC011005.3-201ENST00000491624 395 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AC008897.1-201ENST00000494006 347 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF9P41273 NPM1P21-201ENST00000513394 762 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFSF9P41273 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AC008147.3-201ENST00000548666 354 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.18□□□□□ -1.58
TNFSF9P41273 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.18□□□□□ -1.58
TNFSF9P41273 MIR4433B-201ENST00000581329 102 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF9P41273 ELOCP28-201ENST00000590044 317 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 AL161616.1-201ENST00000611867 286 ntBASIC5.18□□□□□ -1.58
TNFSF9P41273 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF9P41273 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF9P41273 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.18□□□□□ -1.58
TNFSF9P41273 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
TNFSF9P41273 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 CASC19-255ENST00000641733 1385 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC093671.1-201ENST00000624981 2929 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
TNFSF9P41273 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 ARL4AP5-201ENST00000404372 599 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF9P41273 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 HMGB1P32-201ENST00000425971 565 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF9P41273 AC079168.2-201ENST00000453977 416 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 AC114982.2-201ENST00000461396 358 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 RN7SL738P-201ENST00000470264 297 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 RN7SL205P-201ENST00000490174 284 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF9P41273 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 BNIP3P1-201ENST00000547295 580 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 FKBP1BP1-201ENST00000553366 325 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.17□□□□□ -1.58
TNFSF9P41273 AC079075.1-201ENST00000559543 878 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC087477.6-201ENST00000559595 843 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC105129.1-201ENST00000560250 297 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.17□□□□□ -1.58
TNFSF9P41273 RN7SL52P-201ENST00000584271 284 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC073091.2-201ENST00000603205 907 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 RN7SL722P-201ENST00000617780 284 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 RN7SL565P-201ENST00000618246 284 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AC006453.5-201ENST00000636451 619 ntBASIC5.17□□□□□ -1.58
TNFSF9P41273 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF9P41273 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF9P41273 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
TNFSF9P41273 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.17□□□□□ -1.58
TNFSF9P41273 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.17□□□□□ -1.58
TNFSF9P41273 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF9P41273 MUC2-202ENST00000613187 4845 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF9P41273 MFSD8-216ENST00000641147 4009 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 AC007382.1-201ENST00000624376 2618 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.16□□□□□ -1.58
TNFSF9P41273 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
TNFSF9P41273 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
TNFSF9P41273 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
TNFSF9P41273 AC008549.2-201ENST00000333482 706 ntBASIC5.16□□□□□ -1.58
TNFSF9P41273 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms