Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 DENND2C-202ENST00000393276 5701 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
COL9A1P20849 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL9A1P20849 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.85□□□□□ -1.15
COL9A1P20849 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL9A1P20849 AL133260.1-201ENST00000405720 405 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 RNU4-6P-201ENST00000410804 122 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 RN7SKP205-201ENST00000410999 307 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC7.85□□□□□ -1.15
COL9A1P20849 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
COL9A1P20849 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC7.85□□□□□ -1.15
COL9A1P20849 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.85□□□□□ -1.15
COL9A1P20849 AL391987.1-201ENST00000441025 200 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 TXNP5-201ENST00000441043 315 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.85□□□□□ -1.15
COL9A1P20849 RPS20P21-201ENST00000466859 343 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 AC233724.1-201ENST00000503894 233 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 AC097473.1-201ENST00000508142 408 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 SUMO2P20-201ENST00000520803 283 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 HIGD1AP6-201ENST00000521833 279 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
COL9A1P20849 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.85□□□□□ -1.15
COL9A1P20849 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC7.85□□□□□ -1.15
COL9A1P20849 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC7.85□□□□□ -1.15
COL9A1P20849 FAM106CP-201ENST00000582212 507 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 SS18L2P2-201ENST00000583960 235 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 MIR212-201ENST00000586026 110 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 MIR663AHG-213ENST00000596767 837 ntTSL 5 BASIC7.85□□□□□ -1.15
COL9A1P20849 AL158151.4-201ENST00000600965 507 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 RN7SL715P-201ENST00000606972 286 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 PLCE1P1-201ENST00000622094 305 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 AC005753.1-201ENST00000623837 618 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 AC010653.3-201ENST00000635332 232 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL9A1P20849 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.85□□□□□ -1.15
COL9A1P20849 TMEM169-201ENST00000295658 3342 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
COL9A1P20849 STXBP5L-205ENST00000472879 3067 ntTSL 5 BASIC7.85□□□□□ -1.15
COL9A1P20849 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.85□□□□□ -1.15
COL9A1P20849 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL9A1P20849 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC7.85□□□□□ -1.15
COL9A1P20849 GUCY2GP-201ENST00000479705 3222 ntBASIC7.85□□□□□ -1.15
COL9A1P20849 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
COL9A1P20849 ANKS1B-220ENST00000550693 3372 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
COL9A1P20849 VAMP3-201ENST00000054666 2205 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 URM1-202ENST00000372850 3045 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 GSTCD-211ENST00000515279 4273 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 AC025125.1-201ENST00000624743 1922 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 TFRC-201ENST00000360110 5111 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 RNU6-251P-201ENST00000363235 104 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 RNA5SP260-201ENST00000363849 111 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 Y_RNA.288-201ENST00000364854 92 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 RNY1P14-201ENST00000384426 108 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 RNU6-310P-201ENST00000384655 107 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 H2AFZP3-201ENST00000394213 387 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 SUMO3-202ENST00000397893 520 ntTSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 AC080125.1-201ENST00000414888 684 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 YWHAZP3-201ENST00000415292 738 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 RPS10P21-201ENST00000430654 475 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 RPS29P14-201ENST00000431518 171 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 SETP20-201ENST00000457046 852 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 PABPC1P1-201ENST00000506347 591 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AC018797.3-201ENST00000513388 1241 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 Y_RNA.721-201ENST00000517207 102 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AC100823.2-201ENST00000518337 699 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.84□□□□□ -1.15
COL9A1P20849 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC7.84□□□□□ -1.15
COL9A1P20849 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.84□□□□□ -1.15
COL9A1P20849 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC7.84□□□□□ -1.15
COL9A1P20849 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.84□□□□□ -1.15
COL9A1P20849 AC090312.1-201ENST00000580637 348 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AC110743.1-201ENST00000584870 478 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 BNIP3P16-201ENST00000589779 534 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AL513327.3-201ENST00000602618 469 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 AL451085.1-201ENST00000604546 690 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 AL390877.1-201ENST00000605704 214 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC7.84□□□□□ -1.15
COL9A1P20849 BCL2L11-224ENST00000639340 243 ntTSL 5 BASIC7.84□□□□□ -1.15
COL9A1P20849 CASC19-232ENST00000641480 1244 ntBASIC7.84□□□□□ -1.15
COL9A1P20849 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 AL353052.2-201ENST00000441459 2241 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 EYA3-203ENST00000373871 6085 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL9A1P20849 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms