Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PACRG-211ENST00000621363 360 ntTSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AC005841.2-201ENST00000637658 1167 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 AL121722.1-201ENST00000638550 4849 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 TCF4-246ENST00000570287 3163 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC8.23□□□□□ -1.09
VARS2Q5ST30 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
VARS2Q5ST30 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 LARGE-AS1-203ENST00000438159 2618 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 CCT5-201ENST00000280326 3675 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC105046.1-201ENST00000566457 4997 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AL353807.3-201ENST00000500626 2505 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 MAPK10-343ENST00000641677 2546 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 VPS36-201ENST00000378060 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 RNU5E-1-201ENST00000362477 120 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RNU6-1097P-201ENST00000363586 107 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RNU6-280P-201ENST00000364145 104 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RNU1-115P-201ENST00000365329 160 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RNU6-81P-201ENST00000365608 104 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 DSTNP4-201ENST00000399472 474 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 MIR1272-201ENST00000408106 129 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 SNX18P13-201ENST00000412442 529 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 UQCRBP1-201ENST00000421129 336 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 OR4K11P-201ENST00000431829 904 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 HMGB3P11-201ENST00000440127 604 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 CHIAP1-201ENST00000456220 995 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC017015.1-201ENST00000477387 286 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 NDUFS5P2-201ENST00000484004 306 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RPL32P9-201ENST00000487963 407 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RN7SL182P-201ENST00000496499 300 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AL445187.1-201ENST00000502685 260 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC112184.1-201ENST00000505179 312 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 OR4R1P-201ENST00000529879 463 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC103843.2-201ENST00000530523 682 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AL049839.1-201ENST00000556151 657 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC130289.1-201ENST00000577321 73 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 OR4K8P-201ENST00000578842 1048 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AL022099.1-201ENST00000604551 712 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC011890.2-201ENST00000613393 294 ntBASIC8.22□□□□□ -1.09
VARS2Q5ST30 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC000099.1-202ENST00000413812 1912 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 RAB3IP-215ENST00000551641 2840 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 SERPINA9-202ENST00000337425 1755 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
VARS2Q5ST30 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 TMEM99-204ENST00000622451 2073 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
VARS2Q5ST30 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
VARS2Q5ST30 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.21□□□□□ -1.09
VARS2Q5ST30 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 LINC01358-211ENST00000635571 1687 ntTSL 5 BASIC8.21□□□□□ -1.09
VARS2Q5ST30 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 AC006141.1-201ENST00000581917 2170 ntBASIC8.21□□□□□ -1.09
VARS2Q5ST30 SERPIND1-201ENST00000215727 2437 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 AL445235.1-201ENST00000431202 1747 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
VARS2Q5ST30 LPAR6-202ENST00000378434 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms