Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 TMSB4XP4-201ENST00000323496 618 ntBASIC4.53□□□□□ -1.68
CDX1P47902 MIR323A-201ENST00000362199 86 ntBASIC4.53□□□□□ -1.68
CDX1P47902 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 RNU6-317P-201ENST00000384031 107 ntBASIC4.53□□□□□ -1.68
CDX1P47902 MIR323B-201ENST00000385269 82 ntBASIC4.53□□□□□ -1.68
CDX1P47902 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CDX1P47902 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 MIR1271-201ENST00000408537 86 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RN7SKP206-201ENST00000410823 293 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RN7SKP29-201ENST00000410957 272 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AL158050.1-201ENST00000416077 457 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AL606495.1-201ENST00000422100 813 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 MTCO2P1-201ENST00000424648 477 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AC005189.1-201ENST00000431286 310 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AL031663.1-201ENST00000437445 219 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 ELOCP10-201ENST00000440624 327 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RPL6P5-201ENST00000445678 828 ntBASIC4.53□□□□□ -1.68
CDX1P47902 HMGN1P36-201ENST00000446623 298 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 LRRC37A14P-201ENST00000452297 462 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AC005229.2-201ENST00000456995 399 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RPS27AP2-201ENST00000457576 465 ntBASIC4.53□□□□□ -1.68
CDX1P47902 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 AC021660.1-201ENST00000465006 554 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RN7SL273P-201ENST00000481561 299 ntBASIC4.53□□□□□ -1.68
CDX1P47902 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 AC005912.1-201ENST00000495392 255 ntBASIC4.53□□□□□ -1.68
CDX1P47902 AC010627.1-201ENST00000503819 1294 ntBASIC4.53□□□□□ -1.68
CDX1P47902 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 AC016550.1-201ENST00000505348 785 ntBASIC4.53□□□□□ -1.68
CDX1P47902 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 RNU6-334P-201ENST00000517072 102 ntBASIC4.53□□□□□ -1.68
CDX1P47902 HMGB1P19-201ENST00000517578 577 ntBASIC4.53□□□□□ -1.68
CDX1P47902 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 POLR2KP1-201ENST00000553226 168 ntBASIC4.53□□□□□ -1.68
CDX1P47902 IGBP1P1-201ENST00000554337 1009 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.53□□□□□ -1.68
CDX1P47902 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.53□□□□□ -1.68
CDX1P47902 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 MTATP6P2-201ENST00000603319 678 ntBASIC4.53□□□□□ -1.68
CDX1P47902 ELOCP34-201ENST00000604436 327 ntBASIC4.53□□□□□ -1.68
CDX1P47902 MIR8084-201ENST00000614105 89 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RN7SL544P-201ENST00000617232 284 ntBASIC4.53□□□□□ -1.68
CDX1P47902 RN7SL763P-201ENST00000620922 284 ntBASIC4.53□□□□□ -1.68
CDX1P47902 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 MIR193BHG-214ENST00000641765 509 ntBASIC4.53□□□□□ -1.68
CDX1P47902 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.53□□□□□ -1.68
CDX1P47902 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.53□□□□□ -1.68
CDX1P47902 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CDX1P47902 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.53□□□□□ -1.69
CDX1P47902 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.53□□□□□ -1.69
CDX1P47902 AC096656.1-201ENST00000623826 1364 ntBASIC4.53□□□□□ -1.69
CDX1P47902 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDX1P47902 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.52□□□□□ -1.69
CDX1P47902 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDX1P47902 AP000357.1-201ENST00000409926 1165 ntBASIC4.52□□□□□ -1.69
CDX1P47902 RN7SKP293-201ENST00000411389 296 ntBASIC4.52□□□□□ -1.69
CDX1P47902 OR2AT2P-201ENST00000413438 905 ntBASIC4.52□□□□□ -1.69
CDX1P47902 MRPL53P1-201ENST00000414323 319 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 AC093155.2-201ENST00000420734 937 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC023128.2-201ENST00000420880 1223 ntBASIC4.52□□□□□ -1.69
CDX1P47902 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.52□□□□□ -1.69
CDX1P47902 SEC63P1-201ENST00000425785 1258 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.52□□□□□ -1.69
CDX1P47902 CRIP1P1-201ENST00000427567 185 ntBASIC4.52□□□□□ -1.69
CDX1P47902 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.52□□□□□ -1.69
CDX1P47902 AL022331.1-201ENST00000429025 477 ntBASIC4.52□□□□□ -1.69
CDX1P47902 FTH1P16-201ENST00000435241 552 ntBASIC4.52□□□□□ -1.69
CDX1P47902 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms