Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC026348.1-201ENST00000462549 1053 ntBASIC5.45□□□□□ -1.54
HADHAP40939 AC022133.1-201ENST00000490961 571 ntBASIC5.45□□□□□ -1.54
HADHAP40939 RPS12P31-201ENST00000491419 398 ntBASIC5.45□□□□□ -1.54
HADHAP40939 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.45□□□□□ -1.54
HADHAP40939 CDH12P2-201ENST00000504393 298 ntBASIC5.45□□□□□ -1.54
HADHAP40939 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.45□□□□□ -1.54
HADHAP40939 HMGB1P44-201ENST00000508597 572 ntBASIC5.45□□□□□ -1.54
HADHAP40939 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.45□□□□□ -1.54
HADHAP40939 HMGN1P9-201ENST00000515212 298 ntBASIC5.45□□□□□ -1.54
HADHAP40939 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.45□□□□□ -1.54
HADHAP40939 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.45□□□□□ -1.54
HADHAP40939 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.45□□□□□ -1.54
HADHAP40939 AL049844.2-201ENST00000604280 628 ntBASIC5.45□□□□□ -1.54
HADHAP40939 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.45□□□□□ -1.54
HADHAP40939 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HADHAP40939 AP002967.1-201ENST00000624203 539 ntBASIC5.45□□□□□ -1.54
HADHAP40939 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
HADHAP40939 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
HADHAP40939 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HADHAP40939 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HADHAP40939 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 RNU6-666P-201ENST00000363499 107 ntBASIC5.44□□□□□ -1.54
HADHAP40939 RN7SKP124-201ENST00000364730 341 ntBASIC5.44□□□□□ -1.54
HADHAP40939 RNU6-609P-201ENST00000365459 107 ntBASIC5.44□□□□□ -1.54
HADHAP40939 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.44□□□□□ -1.54
HADHAP40939 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 SNORA40.4-201ENST00000390971 128 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AL391361.1-201ENST00000405580 489 ntBASIC5.44□□□□□ -1.54
HADHAP40939 PCNPP4-201ENST00000414817 517 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AL121882.1-201ENST00000422893 417 ntBASIC5.44□□□□□ -1.54
HADHAP40939 MORF4L1P7-201ENST00000426038 703 ntBASIC5.44□□□□□ -1.54
HADHAP40939 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.44□□□□□ -1.54
HADHAP40939 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.44□□□□□ -1.54
HADHAP40939 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.44□□□□□ -1.54
HADHAP40939 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 AL589765.3-201ENST00000446084 462 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.44□□□□□ -1.54
HADHAP40939 AC105399.1-202ENST00000447303 205 ntBASIC5.44□□□□□ -1.54
HADHAP40939 RN7SL809P-201ENST00000482040 297 ntBASIC5.44□□□□□ -1.54
HADHAP40939 RPS4XP14-201ENST00000493072 781 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AC090638.1-201ENST00000498296 909 ntBASIC5.44□□□□□ -1.54
HADHAP40939 IGBP1P4-201ENST00000503202 879 ntBASIC5.44□□□□□ -1.54
HADHAP40939 RNA5SP362-201ENST00000516048 118 ntBASIC5.44□□□□□ -1.54
HADHAP40939 RNU6-1308P-201ENST00000516817 103 ntBASIC5.44□□□□□ -1.54
HADHAP40939 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.44□□□□□ -1.54
HADHAP40939 AC093014.1-201ENST00000548926 724 ntBASIC5.44□□□□□ -1.54
HADHAP40939 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC5.44□□□□□ -1.54
HADHAP40939 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.44□□□□□ -1.54
HADHAP40939 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 MTCYBP13-201ENST00000578634 1093 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AC007448.1-201ENST00000582714 234 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.44□□□□□ -1.54
HADHAP40939 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 AL512506.1-201ENST00000613918 449 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AC245389.2-201ENST00000616023 576 ntBASIC5.44□□□□□ -1.54
HADHAP40939 AC242843.1-201ENST00000618702 573 ntBASIC5.44□□□□□ -1.54
HADHAP40939 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.44□□□□□ -1.54
HADHAP40939 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.44□□□□□ -1.54
HADHAP40939 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
HADHAP40939 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.43□□□□□ -1.54
HADHAP40939 CASC19-248ENST00000641674 1356 ntBASIC5.43□□□□□ -1.54
HADHAP40939 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HADHAP40939 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
HADHAP40939 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HADHAP40939 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC5.43□□□□□ -1.54
HADHAP40939 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HADHAP40939 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.43□□□□□ -1.54
HADHAP40939 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HADHAP40939 OR9K1P-201ENST00000326513 941 ntBASIC5.43□□□□□ -1.54
HADHAP40939 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.43□□□□□ -1.54
HADHAP40939 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 365.5 ms