Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RPL7-203ENST00000396466 762 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL589647.1-201ENST00000402485 466 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 GSTA9P-201ENST00000406231 611 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RN7SKP39-201ENST00000410773 322 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 C1DP2-201ENST00000418167 426 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 CLIC4P3-201ENST00000422221 752 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC007568.1-201ENST00000422912 471 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 NIPA2P1-201ENST00000426223 976 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 NPM1P22-201ENST00000427761 952 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC073335.1-201ENST00000427776 363 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 ZYG11AP1-201ENST00000430329 837 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC092809.1-201ENST00000441469 474 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RPS4XP4-201ENST00000443195 763 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 MGAT2P1-201ENST00000449718 797 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC091564.1-201ENST00000464563 479 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RN7SL338P-201ENST00000481467 293 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC079944.1-201ENST00000485426 495 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 CYB5A-204ENST00000494131 776 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RN7SL187P-201ENST00000495587 303 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RN7SL445P-201ENST00000495609 293 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC117383.2-201ENST00000514722 322 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 IGLV3-6-201ENST00000523937 250 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL157687.1-201ENST00000554853 619 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 HMGB1P33-201ENST00000563485 527 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC130456.5-201ENST00000569345 510 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 MRPS21P9-201ENST00000571150 257 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC060780.3-201ENST00000589464 80 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC044792.1-201ENST00000593294 196 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 SIGLEC31P-201ENST00000594237 551 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RPS28P1-201ENST00000604589 187 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC243756.2-201ENST00000618406 463 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 TCL6_3.1-201ENST00000619064 137 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AP003400.3-201ENST00000624904 346 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SHISA3A0PJX4 AC012213.2-201ENST00000562917 4597 ntBASIC5.9□□□□□ -1.46
SHISA3A0PJX4 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 EPS15P1-202ENST00000459691 2071 ntBASIC5.9□□□□□ -1.47
SHISA3A0PJX4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 RARSP1-201ENST00000542842 1418 ntBASIC5.9□□□□□ -1.47
SHISA3A0PJX4 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHISA3A0PJX4 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 AP003066.1-201ENST00000527528 1647 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 IGKV7-3-201ENST00000357453 298 ntBASIC5.89□□□□□ -1.47
SHISA3A0PJX4 U3.1-201ENST00000362500 215 ntBASIC5.89□□□□□ -1.47
SHISA3A0PJX4 RN7SKP118-201ENST00000364331 330 ntBASIC5.89□□□□□ -1.47
SHISA3A0PJX4 SNORA70.3-201ENST00000365075 132 ntBASIC5.89□□□□□ -1.47
SHISA3A0PJX4 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHISA3A0PJX4 SNORA51.12-201ENST00000384448 134 ntBASIC5.89□□□□□ -1.47
SHISA3A0PJX4 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms