Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 NANOGP4-201ENST00000427230 913 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AC009238.2-201ENST00000431026 355 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 MTND4P15-201ENST00000437913 1033 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 RPS29P10-201ENST00000439197 166 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL513321.1-201ENST00000441175 761 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 FHP1-201ENST00000442741 703 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 SUMO2P1-206ENST00000445436 284 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 NIFKP7-201ENST00000503365 834 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AC024940.3-201ENST00000538551 316 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL022394.1-201ENST00000606979 292 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 FRG1EP-201ENST00000634469 770 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 STX3-208ENST00000641815 3236 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL121839.2-201ENST00000565058 6943 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SNORA51.1-201ENST00000363243 140 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 U3.32-201ENST00000408116 212 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 NPM1P40-201ENST00000412758 733 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC073464.3-201ENST00000422564 712 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 MTATP6P11-201ENST00000428071 670 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AL160175.1-201ENST00000428124 247 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 RNU7-27P-201ENST00000459281 62 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC009127.1-201ENST00000467090 155 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SNRPCP3-201ENST00000474888 476 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 BX284632.1-201ENST00000478218 541 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 RPL7P39-201ENST00000481157 744 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC072052.1-201ENST00000496556 306 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 GTF2F2P1-201ENST00000511083 675 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 HIGD1AP18-201ENST00000520730 278 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AL512310.9-201ENST00000553311 948 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC007225.2-201ENST00000562529 256 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC233266.2-201ENST00000567067 528 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 BNIP3P35-201ENST00000604530 490 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC110792.4-201ENST00000609843 298 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AL512624.1-201ENST00000613638 469 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC135068.12-201ENST00000637370 931 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC010329.2-201ENST00000595195 2737 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 SAMMSON-213ENST00000641336 1521 ntBASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
BLOC1S4Q9NUP1 AC092079.1-201ENST00000558620 1985 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 MTCO1P11-201ENST00000429111 1528 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 U3.7-201ENST00000363668 216 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 RNA5SP223-201ENST00000365174 120 ntBASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
BLOC1S4Q9NUP1 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms