Protein–RNA interactions for Protein: Q9BVL2

NUP58, Nucleoporin p58/p45, humanhuman

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58Q9BVL2 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
NUP58Q9BVL2 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP58Q9BVL2 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.48□□□□□ -1.53
NUP58Q9BVL2 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
NUP58Q9BVL2 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
NUP58Q9BVL2 AC083843.3-201ENST00000623679 2186 ntBASIC5.48□□□□□ -1.53
NUP58Q9BVL2 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 RNA5SP305-201ENST00000362665 119 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 RNU1-43P-201ENST00000365052 165 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AL353625.1-202ENST00000366273 571 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 LRRC37BP1-201ENST00000398851 714 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AL645733.1-201ENST00000402250 217 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AL356968.2-201ENST00000412769 1257 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AL034379.1-201ENST00000423216 253 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC090686.1-201ENST00000481577 749 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC109462.1-201ENST00000491087 368 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC073358.1-201ENST00000505671 684 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC233702.9-201ENST00000581528 203 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC005229.3-201ENST00000603438 323 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC024940.4-201ENST00000605507 246 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC116651.1-201ENST00000609724 556 ntBASIC5.47□□□□□ -1.53
NUP58Q9BVL2 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.47□□□□□ -1.53
NUP58Q9BVL2 DHX9P1-201ENST00000436565 3076 ntBASIC5.46□□□□□ -1.53
NUP58Q9BVL2 AC131971.1-201ENST00000332881 1482 ntBASIC5.46□□□□□ -1.53
NUP58Q9BVL2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.46□□□□□ -1.53
NUP58Q9BVL2 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.53
NUP58Q9BVL2 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 SNORA73.1-201ENST00000363107 205 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 MIR550A3-201ENST00000390735 95 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 VN1R54P-201ENST00000435210 1049 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 RPS29P9-201ENST00000440360 171 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL691482.1-201ENST00000453255 87 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 HMGB1P4-201ENST00000455362 567 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 CYCSP34-201ENST00000458172 304 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 RPS17P2-201ENST00000461663 408 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 RN7SL517P-201ENST00000462240 305 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC020890.1-201ENST00000491837 504 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC024940.3-201ENST00000538551 316 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 CYCSP40-201ENST00000575927 294 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 MIR4646-201ENST00000580775 63 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL136295.6-201ENST00000610486 658 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 AC107068.1-201ENST00000563286 4218 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 HSPA8P18-201ENST00000439846 1928 ntBASIC5.46□□□□□ -1.54
NUP58Q9BVL2 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
NUP58Q9BVL2 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NUP58Q9BVL2 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.45□□□□□ -1.54
NUP58Q9BVL2 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms