Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 SNX18P3-202ENST00000565670 1750 ntBASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.11□□□□□ -1.43
PTCHD1Q96NR3 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC100871.1-201ENST00000507871 1456 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 DCAF13P3-201ENST00000561147 1334 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 Y_RNA.88-201ENST00000363029 99 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 RNU4-91P-201ENST00000364778 135 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 Y_RNA.408-201ENST00000383987 102 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 VN1R12P-201ENST00000403778 876 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 MIR548F1-201ENST00000408667 84 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AL513325.1-201ENST00000417716 1034 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 DPY19L1P2-201ENST00000426647 915 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC00328-2P-201ENST00000436585 219 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 RPL7P29-201ENST00000437151 728 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC093392.2-201ENST00000450682 337 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 OR6C5P-201ENST00000452388 923 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AL359385.1-201ENST00000456509 365 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 PNPLA4P1-201ENST00000458328 305 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 RNA5SP269-201ENST00000459032 137 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 MTCO3P38-201ENST00000468910 766 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 RPL23AP64-201ENST00000469465 435 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 RPL29P23-201ENST00000486188 442 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ACTG1P13-201ENST00000486987 1043 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 H3F3AP3-201ENST00000497682 407 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 CYP4F27P-201ENST00000514557 494 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 RNU6-1225P-201ENST00000516336 65 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 IGJP1-201ENST00000522682 475 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 OR52K3P-201ENST00000531655 943 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 OR6C7P-201ENST00000547875 934 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC005771.1-201ENST00000585581 349 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 OR4G1P-201ENST00000588632 938 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ELOCP28-201ENST00000590044 317 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC063977.7-201ENST00000594454 337 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC011891.2-201ENST00000604949 397 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC005962.2-201ENST00000611427 652 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC016769.4-201ENST00000616893 535 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC241377.1-201ENST00000619797 406 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AC005618.1-201ENST00000606901 3148 ntBASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.1□□□□□ -1.43
PTCHD1Q96NR3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PTCHD1Q96NR3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms