Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 IL6-206ENST00000407492 926 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 CTSL3P-202ENST00000412179 788 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AL359265.2-201ENST00000434367 631 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC012512.1-201ENST00000446594 718 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 RHEBP2-201ENST00000450289 600 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 RN7SL354P-201ENST00000469282 294 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC116562.1-201ENST00000485355 781 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 HPRT1P1-201ENST00000509498 657 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC6.82□□□□□ -1.32
CCDC7Q96M83 TVP23CP2-201ENST00000571473 623 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 CYCSP40-201ENST00000575927 294 ntBASIC6.82□□□□□ -1.32
CCDC7Q96M83 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CCDC7Q96M83 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC7Q96M83 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC7Q96M83 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC7Q96M83 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC7Q96M83 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 AC008549.2-201ENST00000333482 706 ntBASIC6.81□□□□□ -1.32
CCDC7Q96M83 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC7Q96M83 CKS1BP6-201ENST00000424932 240 ntBASIC6.81□□□□□ -1.32
CCDC7Q96M83 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 MORF4L1P3-201ENST00000525966 950 ntBASIC6.81□□□□□ -1.32
CCDC7Q96M83 AL049839.1-201ENST00000556151 657 ntBASIC6.81□□□□□ -1.32
CCDC7Q96M83 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 AC019193.2-201ENST00000610012 634 ntBASIC6.81□□□□□ -1.32
CCDC7Q96M83 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC6.81□□□□□ -1.32
CCDC7Q96M83 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
CCDC7Q96M83 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 SMG1P6-201ENST00000532337 2930 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 AC022893.2-201ENST00000564832 3296 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 DHX9P1-201ENST00000436565 3076 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 AC017079.1-201ENST00000333650 415 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 HMGB3P7-201ENST00000400214 611 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 RGS17P1-201ENST00000423358 553 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 HSPE1P27-201ENST00000430808 296 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 CYCSP42-201ENST00000450823 238 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 AL512782.1-201ENST00000603093 364 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 AC010424.2-201ENST00000607594 443 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 AC019206.1-201ENST00000621938 425 ntBASIC6.8□□□□□ -1.32
CCDC7Q96M83 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.8□□□□□ -1.32
CCDC7Q96M83 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CCDC7Q96M83 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC7Q96M83 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC7Q96M83 ZNF652P1-201ENST00000442420 1309 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CCDC7Q96M83 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 ARL4AP5-201ENST00000404372 599 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 GTF3AP5-201ENST00000442645 697 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 RN7SL319P-201ENST00000480656 221 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 AC034205.1-201ENST00000520621 638 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 AC020910.3-201ENST00000603701 874 ntBASIC6.79□□□□□ -1.32
CCDC7Q96M83 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.79□□□□□ -1.32
CCDC7Q96M83 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms