Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 AP001005.3-201ENST00000622049 129 ntBASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 AC092376.2-201ENST00000622621 4116 ntBASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
BLOC1S4Q9NUP1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 RNU1-43P-201ENST00000365052 165 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 RNU6-171P-201ENST00000384354 107 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 OR8V1P-201ENST00000395193 873 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 MIR1286-201ENST00000408112 78 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 RN7SKP222-201ENST00000410651 315 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AL161722.2-201ENST00000434731 981 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 RPL7AP61-201ENST00000443410 636 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC012400.1-201ENST00000518452 381 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC125612.1-201ENST00000547580 377 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 OR11J2P-201ENST00000555298 907 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 SS18L2P2-201ENST00000583960 235 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC005520.3-201ENST00000602874 370 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC108359.1-201ENST00000616451 1211 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AC025016.1-201ENST00000616746 682 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 AL122125.1-201ENST00000616999 600 ntBASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
BLOC1S4Q9NUP1 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 PANDAR-201ENST00000629595 1506 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 PABPC1P6-201ENST00000445594 1829 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC002525.1-201ENST00000624392 1622 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC007618.1-201ENST00000366455 732 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 DUTP5-201ENST00000406790 469 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 GAPDHP58-201ENST00000438477 1006 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 CASP3P1-201ENST00000446037 609 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC097173.1-201ENST00000505862 819 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC100784.1-201ENST00000522790 310 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AL512329.2-201ENST00000607350 548 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 RPSAP73-201ENST00000614820 330 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC011472.4-201ENST00000615848 491 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 ADAM5-202ENST00000399789 1942 ntBASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
BLOC1S4Q9NUP1 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 AL356057.1-202ENST00000402263 756 ntBASIC5.78□□□□□ -1.48
BLOC1S4Q9NUP1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms