Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AL049641.1-201ENST00000441055 1948 ntBASIC7.21□□□□□ -1.26
USB1Q9BQ65 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 NRXN1-206ENST00000402717 2508 ntTSL 5 BASIC7.21□□□□□ -1.26
USB1Q9BQ65 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
USB1Q9BQ65 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 HSD17B4-220ENST00000513628 2225 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 CSNK2A1-201ENST00000217244 4416 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AL512646.1-201ENST00000269395 1077 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 OR7A17-201ENST00000327462 1127 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 MIR135B-201ENST00000362189 97 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 RNU6-522P-201ENST00000364497 107 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 RNY4P16-201ENST00000364768 94 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 Y_RNA.574-201ENST00000384766 95 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 MIR614-201ENST00000385082 90 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 CBX1P3-201ENST00000413296 527 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC023141.1-201ENST00000419418 379 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 RPL34P6-201ENST00000432390 345 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AL138799.3-201ENST00000438968 350 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 ACTP1-201ENST00000440793 383 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 MIR2053-201ENST00000459295 91 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 RN7SKP24-201ENST00000515888 284 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 SNORA25.10-201ENST00000515926 124 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 RNU6-1088P-201ENST00000516850 104 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 RNA5SP337-201ENST00000517007 109 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 PPP1R1AP1-201ENST00000525622 425 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 RNF185-AS1-201ENST00000526089 353 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC055736.1-201ENST00000548135 629 ntTSL 3 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 PFDN5-214ENST00000551018 847 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 HNRNPA1P71-201ENST00000559135 950 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC022165.1-201ENST00000568771 596 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 PROX1-AS1-208ENST00000601335 691 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AL358335.3-201ENST00000604678 327 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 AL109933.4-201ENST00000612111 157 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC133104.2-201ENST00000615272 193 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 RN7SL820P-201ENST00000616437 299 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 MOSPD1-203ENST00000370783 2364 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 BMPR1APS1-201ENST00000403332 1598 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 AC104118.1-201ENST00000607625 1589 ntBASIC7.2□□□□□ -1.26
USB1Q9BQ65 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.2□□□□□ -1.26
USB1Q9BQ65 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
USB1Q9BQ65 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 OR4F15-201ENST00000332238 2119 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 COPG1-201ENST00000314797 3078 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 MAGEC1-201ENST00000285879 4270 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 AC114786.2-201ENST00000510090 1426 ntBASIC7.19□□□□□ -1.26
USB1Q9BQ65 HAVCR1-205ENST00000523175 1449 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC7.19□□□□□ -1.26
USB1Q9BQ65 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
USB1Q9BQ65 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms