Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC00960-202ENST00000492922 2126 ntTSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 DGKG-203ENST00000382164 3152 ntTSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 TMC1-202ENST00000340019 3068 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 ZHX3-218ENST00000560364 4283 ntTSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 TRIM16-212ENST00000578237 3206 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
LRCH3Q96II8 LRRC2-AS1-201ENST00000599511 2291 ntBASIC8.03□□□□□ -1.12
LRCH3Q96II8 MXI1-203ENST00000361248 2188 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
LRCH3Q96II8 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.12
LRCH3Q96II8 AC108099.1-201ENST00000564402 3258 ntBASIC8.02□□□□□ -1.12
LRCH3Q96II8 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 LINC01206-202ENST00000474045 2240 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 ERGIC1-201ENST00000326654 3952 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 VSIG1-202ENST00000415430 3236 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 PPP2R5C-218ENST00000556260 2013 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 EZH2-203ENST00000460911 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AGBL4-203ENST00000371838 1353 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC127502.2-201ENST00000602663 2351 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 RNU6-1339P-201ENST00000363574 91 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 SSX6-201ENST00000376932 562 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 GAPDHP42-201ENST00000406848 981 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 MIR1272-201ENST00000408106 129 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 RN7SKP229-201ENST00000410465 302 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 RN7SKP247-201ENST00000411094 308 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 RNA5SP155-201ENST00000411154 129 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 VDAC1P2-201ENST00000423609 850 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 TRBV29OR9-2-201ENST00000427589 333 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL590682.1-201ENST00000437248 344 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 BNIP3P2-201ENST00000441221 577 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC079781.1-201ENST00000441505 394 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 FAM103A2P-201ENST00000444122 354 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC092570.2-201ENST00000452117 1143 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL606490.1-201ENST00000452266 765 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 MTCO1P42-201ENST00000457379 726 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC007731.3-201ENST00000458154 446 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 APOOP2-201ENST00000461561 539 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 RN7SL388P-201ENST00000498736 339 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 RPL38P4-201ENST00000502376 214 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 POU5F1P7-201ENST00000508759 541 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC108120.2-201ENST00000512973 294 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC027308.1-201ENST00000517993 110 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 MTND6P19-201ENST00000519399 524 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 COX6B1P4-201ENST00000519826 484 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 MYL2-203ENST00000548438 664 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC025260.1-201ENST00000548858 430 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC007375.1-201ENST00000554513 578 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC000068.3-201ENST00000607934 427 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AP005329.3-201ENST00000609924 686 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC008115.3-201ENST00000614874 549 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 OR4G1P-203ENST00000641984 1631 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 PRKAR2A-AS1-202ENST00000416209 3447 ntTSL 2 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 NUGGC-201ENST00000413272 3887 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 AC010894.3-201ENST00000442996 2400 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 PTER-203ENST00000423462 3212 ntTSL 3 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 CNTN4-201ENST00000397459 2322 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 CABYR-206ENST00000463087 1792 ntAPPRIS P4 TSL 5 BASIC8.02□□□□□ -1.13
LRCH3Q96II8 LRRC37A17P-201ENST00000570311 4693 ntBASIC8.02□□□□□ -1.13
LRCH3Q96II8 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LRCH3Q96II8 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 RAB5B-210ENST00000553116 3322 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LRCH3Q96II8 AGXT2-206ENST00000618015 2181 ntTSL 5 BASIC8.01□□□□□ -1.13
LRCH3Q96II8 GOSR2-238ENST00000640495 3395 ntTSL 5 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms