Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.45□□□□□ -1.54
CAPN3P20807 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
CAPN3P20807 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CAPN3P20807 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CAPN3P20807 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
CAPN3P20807 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CAPN3P20807 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.45□□□□□ -1.54
CAPN3P20807 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CAPN3P20807 AC018809.2-201ENST00000602436 3823 ntBASIC5.45□□□□□ -1.54
CAPN3P20807 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CAPN3P20807 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CAPN3P20807 AC006042.3-201ENST00000454684 1469 ntBASIC5.45□□□□□ -1.54
CAPN3P20807 AL137100.1-201ENST00000556703 1620 ntBASIC5.45□□□□□ -1.54
CAPN3P20807 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC004158.1-201ENST00000564508 4319 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 BCORP1-203ENST00000513194 5093 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CAPN3P20807 RNA5SP273-201ENST00000362484 113 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CAPN3P20807 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
CAPN3P20807 U3.28-201ENST00000391249 210 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 ATP5F1P6-201ENST00000402768 767 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC016739.1-201ENST00000405359 345 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AL357752.1-201ENST00000412817 349 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AL354890.1-201ENST00000413730 346 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 BX284632.2-201ENST00000421091 399 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 VTI1BP4-201ENST00000427516 527 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC093422.3-201ENST00000428506 305 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 RPS20P1-201ENST00000434853 354 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 RPL36AP39-201ENST00000445859 318 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC106872.5-201ENST00000508856 1416 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC092593.2-201ENST00000513866 913 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC139365.2-201ENST00000517972 253 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 IGLV3-30-201ENST00000524362 298 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AP000648.1-201ENST00000529682 397 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC107918.3-201ENST00000533272 382 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.44□□□□□ -1.54
CAPN3P20807 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC027216.1-201ENST00000577726 685 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 AL031601.1-201ENST00000605702 394 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AP000864.1-201ENST00000609424 650 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC004948.1-201ENST00000609858 672 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC016769.4-201ENST00000616893 535 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AL163051.2-201ENST00000618976 735 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.44□□□□□ -1.54
CAPN3P20807 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 RNF6P1-201ENST00000444889 1784 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 AC008432.1-201ENST00000615912 1320 ntBASIC5.44□□□□□ -1.54
CAPN3P20807 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.44□□□□□ -1.54
CAPN3P20807 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CAPN3P20807 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
CAPN3P20807 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CAPN3P20807 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CAPN3P20807 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CAPN3P20807 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CAPN3P20807 CASC19-248ENST00000641674 1356 ntBASIC5.43□□□□□ -1.54
CAPN3P20807 OR9K1P-202ENST00000641111 3217 ntBASIC5.43□□□□□ -1.54
CAPN3P20807 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.43□□□□□ -1.54
CAPN3P20807 OR4F13P-202ENST00000560066 2054 ntBASIC5.43□□□□□ -1.54
CAPN3P20807 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.43□□□□□ -1.54
CAPN3P20807 RN7SKP160-201ENST00000363804 340 ntBASIC5.43□□□□□ -1.54
CAPN3P20807 SNORA58B-201ENST00000364259 136 ntBASIC5.43□□□□□ -1.54
CAPN3P20807 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CAPN3P20807 RN7SKP29-201ENST00000410957 272 ntBASIC5.43□□□□□ -1.54
CAPN3P20807 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.43□□□□□ -1.54
CAPN3P20807 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms