Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC025125.1-201ENST00000624743 1922 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 GIN1-201ENST00000399004 3229 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 BRPF3-212ENST00000534694 4628 ntTSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 PPFIBP1-207ENST00000537927 5719 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 CKAP2-203ENST00000378037 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 LINC02009-201ENST00000635852 2951 ntTSL 3 BASIC7.67□□□□□ -1.18
HLA-CQ95604 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 KPNB1-202ENST00000535458 3163 ntTSL 2 BASIC7.67□□□□□ -1.18
HLA-CQ95604 FAM19A2-211ENST00000550003 2499 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 AC016722.3-201ENST00000568862 2463 ntBASIC7.67□□□□□ -1.18
HLA-CQ95604 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 COL6A5-201ENST00000265379 9214 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
HLA-CQ95604 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
HLA-CQ95604 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 MYO1A-201ENST00000300119 3621 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 ZNF611-203ENST00000540744 4417 ntAPPRIS P1 TSL 4 BASIC7.66□□□□□ -1.18
HLA-CQ95604 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC130304.1-201ENST00000622942 2385 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 MIR369-201ENST00000362155 70 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 RNA5SP152-201ENST00000365184 110 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 Y_RNA.445-201ENST00000384168 102 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 RNU6-456P-201ENST00000384493 107 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 MT-TG-201ENST00000387429 68 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 RNA5SP115-201ENST00000411160 107 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 GSTA10P-201ENST00000412182 576 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 RPS6P23-201ENST00000413224 722 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 LYPLA1P1-201ENST00000434514 622 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 RPL23AP19-201ENST00000436229 369 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 RN7SL221P-201ENST00000466190 281 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 RN7SL306P-201ENST00000492941 296 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AC011352.2-201ENST00000514574 1016 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 CASC11-203ENST00000519071 791 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 IGKV2-29-201ENST00000521304 372 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC110588.1-201ENST00000559699 137 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 HMGB1P6-201ENST00000569046 646 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC009597.2-201ENST00000604659 592 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AL008726.1-201ENST00000607703 569 ntTSL 4 BASIC7.66□□□□□ -1.18
HLA-CQ95604 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC7.66□□□□□ -1.18
HLA-CQ95604 MIR6729-201ENST00000618194 65 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 OR51E2-201ENST00000396950 2781 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
HLA-CQ95604 CDY4P-201ENST00000418290 1513 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 ADCY10P1-203ENST00000567255 4569 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 UGT2B27P-201ENST00000505092 1620 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 AC108099.1-201ENST00000564402 3258 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 FAM13A-205ENST00000503556 3386 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 CARF-201ENST00000320443 5209 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 SORL1-212ENST00000534286 3501 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC090017.1-201ENST00000548612 1779 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 SPTAN1-222ENST00000630804 7812 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 AC093311.1-201ENST00000506586 2021 ntBASIC7.66□□□□□ -1.18
HLA-CQ95604 FOPNL-206ENST00000573968 2039 ntTSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
HLA-CQ95604 DAAM1-201ENST00000360909 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 GSTCD-201ENST00000360505 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
HLA-CQ95604 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.66□□□□□ -1.18
HLA-CQ95604 FTO-222ENST00000637969 2889 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 SNX25-207ENST00000618785 3151 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC7.65□□□□□ -1.18
HLA-CQ95604 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 NUMA1-232ENST00000613205 3940 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC7.65□□□□□ -1.18
HLA-CQ95604 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
HLA-CQ95604 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms