Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 SNORA71.2-201ENST00000364941 134 ntBASIC6.49□□□□□ -1.37
COL16A1Q07092 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 PSAT1P4-201ENST00000466500 526 ntBASIC6.49□□□□□ -1.37
COL16A1Q07092 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.49□□□□□ -1.37
COL16A1Q07092 TRAV8-5-201ENST00000537369 341 ntBASIC6.49□□□□□ -1.37
COL16A1Q07092 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.49□□□□□ -1.37
COL16A1Q07092 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC6.49□□□□□ -1.37
COL16A1Q07092 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.49□□□□□ -1.37
COL16A1Q07092 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC6.49□□□□□ -1.37
COL16A1Q07092 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL16A1Q07092 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
COL16A1Q07092 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL16A1Q07092 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
COL16A1Q07092 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.48□□□□□ -1.37
COL16A1Q07092 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
COL16A1Q07092 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL16A1Q07092 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL16A1Q07092 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
COL16A1Q07092 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.48□□□□□ -1.37
COL16A1Q07092 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL16A1Q07092 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.48□□□□□ -1.37
COL16A1Q07092 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL16A1Q07092 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL16A1Q07092 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL16A1Q07092 RNA5SP366-201ENST00000365454 123 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 GNG5P2-201ENST00000372054 207 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 LINC00993-201ENST00000420453 540 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 AC009238.2-201ENST00000431026 355 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 AC105137.1-201ENST00000484355 562 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 AC006499.6-201ENST00000511169 607 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 AP003730.1-201ENST00000524605 285 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.48□□□□□ -1.37
COL16A1Q07092 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.48□□□□□ -1.37
COL16A1Q07092 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC6.48□□□□□ -1.37
COL16A1Q07092 BX005214.3-202ENST00000619809 325 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC6.48□□□□□ -1.37
COL16A1Q07092 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL16A1Q07092 AC106871.1-201ENST00000568324 3102 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 AC008758.3-201ENST00000507003 1829 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.48□□□□□ -1.37
COL16A1Q07092 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL16A1Q07092 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC6.48□□□□□ -1.37
COL16A1Q07092 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.48□□□□□ -1.37
COL16A1Q07092 AL079305.1-201ENST00000623159 3008 ntBASIC6.48□□□□□ -1.37
COL16A1Q07092 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 RN7SKP185-201ENST00000362813 326 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 SNORA9-201ENST00000384215 133 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL16A1Q07092 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 AC017019.1-201ENST00000426129 261 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 RPL6P5-201ENST00000445678 828 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 BX842559.2-201ENST00000451418 605 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 RN7SL810P-201ENST00000493031 276 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 AC108475.1-201ENST00000507880 950 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.47□□□□□ -1.37
COL16A1Q07092 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL16A1Q07092 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 OR51H2P-202ENST00000641424 3046 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 RN7SKP202-201ENST00000410439 330 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 RN7SL98P-201ENST00000462271 300 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC6.47□□□□□ -1.37
COL16A1Q07092 AC079064.1-201ENST00000528365 362 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL16A1Q07092 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 AL133243.1-201ENST00000614487 366 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 AC243756.2-201ENST00000618406 463 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC6.47□□□□□ -1.37
COL16A1Q07092 U3.53-201ENST00000628922 216 ntBASIC6.47□□□□□ -1.37
COL16A1Q07092 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL16A1Q07092 DTHD1-201ENST00000357504 3203 ntTSL 2 BASIC6.46□□□□□ -1.37
COL16A1Q07092 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL16A1Q07092 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL16A1Q07092 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
COL16A1Q07092 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL16A1Q07092 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.46□□□□□ -1.37
COL16A1Q07092 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms