Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC093311.1-201ENST00000506586 2021 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 UGT2B26P-201ENST00000508672 1613 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AP002833.3-201ENST00000625075 2265 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 HSPA8P11-201ENST00000508840 1898 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC024560.2-201ENST00000507981 1497 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC069222.1-201ENST00000608028 3360 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 RBMX2P2-201ENST00000257020 946 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SKP184-201ENST00000362348 333 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 Y_RNA.67-201ENST00000362870 100 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC073264.1-201ENST00000411508 416 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL596448.1-201ENST00000415024 392 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 SEPT14P3-201ENST00000439401 183 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL732372.2-207ENST00000445840 183 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 MTCO1P27-201ENST00000448269 226 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 IGKV1OR2-2-201ENST00000451163 355 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 SEPT14P2-201ENST00000453405 183 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC017015.1-201ENST00000477387 286 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC009153.1-201ENST00000485799 496 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 RN7SL612P-201ENST00000497704 295 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 SEPT14P4-201ENST00000513445 186 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC006499.2-201ENST00000513470 337 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 MRPS5P3-201ENST00000515577 166 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 IGKV2-29-201ENST00000521304 372 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 FO082796.1-201ENST00000523795 183 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AP005597.2-201ENST00000526238 341 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC090424.1-201ENST00000535243 736 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC138749.2-201ENST00000566048 167 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL163952.1-202ENST00000569625 600 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC108451.2-201ENST00000603875 538 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 CR382285.1-202ENST00000604687 547 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AL133255.1-201ENST00000606374 441 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC113361.1-201ENST00000606683 543 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC116312.1-201ENST00000606841 314 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 MIR6070-201ENST00000613967 103 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 MIR1302-1-201ENST00000637932 143 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 RND3-202ENST00000375734 2777 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 MED21-201ENST00000282892 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDHB11Q9Y5F2 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 LINC01359-204ENST00000447748 2804 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 AC007996.1-201ENST00000620414 2821 ntBASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 LINC01108-201ENST00000427276 3152 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 ARHGAP24-202ENST00000395183 2740 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 U3.14-201ENST00000365363 227 ntBASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 IARS-201ENST00000375627 697 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 MIR320B1-201ENST00000390209 79 ntBASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 AL034374.1-201ENST00000406329 351 ntBASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 LSM1P1-201ENST00000438629 273 ntBASIC7.19□□□□□ -1.26
PCDHB11Q9Y5F2 CBX1P1-201ENST00000440184 427 ntBASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms