Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 MAPK10-270ENST00000641102 3538 ntBASIC8.04□□□□□ -1.12
IFT140Q96RY7 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC8.04□□□□□ -1.12
IFT140Q96RY7 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
IFT140Q96RY7 STX3-208ENST00000641815 3236 ntBASIC8.03□□□□□ -1.12
IFT140Q96RY7 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 AC073358.1-201ENST00000505671 684 ntBASIC8.03□□□□□ -1.12
IFT140Q96RY7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
IFT140Q96RY7 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 MR1-209ENST00000617803 7584 ntTSL 5 BASIC8.03□□□□□ -1.12
IFT140Q96RY7 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
IFT140Q96RY7 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
IFT140Q96RY7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.02□□□□□ -1.12
IFT140Q96RY7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.02□□□□□ -1.12
IFT140Q96RY7 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 OR14L1P-202ENST00000641545 3009 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 CASC19-243ENST00000641588 1546 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 HSFY6P-201ENST00000445573 403 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 NUTF2P3-201ENST00000448540 384 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 RN7SL542P-201ENST00000467147 294 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 ARF4P1-201ENST00000605447 541 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 AC108359.1-201ENST00000616451 1211 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 AC034229.2-201ENST00000566945 2508 ntBASIC8.02□□□□□ -1.13
IFT140Q96RY7 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
IFT140Q96RY7 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
IFT140Q96RY7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
IFT140Q96RY7 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 RN7SKP267-201ENST00000410381 285 ntBASIC8.01□□□□□ -1.13
IFT140Q96RY7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 MRPL35P2-201ENST00000448009 511 ntBASIC8.01□□□□□ -1.13
IFT140Q96RY7 AC108463.1-201ENST00000450258 347 ntBASIC8.01□□□□□ -1.13
IFT140Q96RY7 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 MTCO1P49-201ENST00000523429 802 ntBASIC8.01□□□□□ -1.13
IFT140Q96RY7 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 AL049794.2-201ENST00000616301 365 ntBASIC8.01□□□□□ -1.13
IFT140Q96RY7 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 UGT2B26P-201ENST00000508672 1613 ntBASIC8.01□□□□□ -1.13
IFT140Q96RY7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
IFT140Q96RY7 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC8.01□□□□□ -1.13
IFT140Q96RY7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
IFT140Q96RY7 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
IFT140Q96RY7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8□□□□□ -1.13
IFT140Q96RY7 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC8□□□□□ -1.13
IFT140Q96RY7 AL022722.2-201ENST00000402519 180 ntBASIC8□□□□□ -1.13
IFT140Q96RY7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8□□□□□ -1.13
IFT140Q96RY7 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC8□□□□□ -1.13
IFT140Q96RY7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC8□□□□□ -1.13
IFT140Q96RY7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC8□□□□□ -1.13
IFT140Q96RY7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
IFT140Q96RY7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC8□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms