Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 OR5H3P-201ENST00000502817 919 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.94□□□□□ -1.62
APOBEC1P41238 HMGB1P44-201ENST00000508597 572 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC104115.2-201ENST00000523026 687 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 CIR1P1-201ENST00000524055 1133 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC027544.3-201ENST00000535082 757 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AL049870.4-201ENST00000555741 486 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC124283.4-201ENST00000581815 456 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC010245.2-201ENST00000606908 1167 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 AC093875.1-201ENST00000623688 504 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 AL022311.1-201ENST00000623726 19416 ntBASIC4.94□□□□□ -1.62
APOBEC1P41238 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4.94□□□□□ -1.62
APOBEC1P41238 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.94□□□□□ -1.62
APOBEC1P41238 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
APOBEC1P41238 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
APOBEC1P41238 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 CASC19-248ENST00000641674 1356 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
APOBEC1P41238 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-1320P-201ENST00000390838 107 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-1269P-201ENST00000391139 107 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 PPIAP9-201ENST00000403866 498 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU4-74P-201ENST00000411280 161 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 HSPE1P16-201ENST00000426640 348 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 RPL23AP4-201ENST00000427757 463 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 RPS27AP6-201ENST00000427962 448 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 MTCO1P43-201ENST00000431831 488 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AL390119.1-201ENST00000440329 312 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AL645638.1-201ENST00000440519 361 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 ARAFP2-201ENST00000440565 559 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.93□□□□□ -1.62
APOBEC1P41238 HMGB1P5-202ENST00000451497 985 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-599P-201ENST00000459383 107 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-1193P-201ENST00000459461 107 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 RN7SL717P-201ENST00000478343 297 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 EIF1P7-201ENST00000487533 337 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC090638.1-201ENST00000498296 909 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-415P-201ENST00000516252 97 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.93□□□□□ -1.62
APOBEC1P41238 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.93□□□□□ -1.62
APOBEC1P41238 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC104229.1-201ENST00000561364 255 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC019322.1-201ENST00000571869 389 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AL135786.2-201ENST00000608422 615 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 AC021851.1-201ENST00000608537 1082 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC078880.5-201ENST00000617845 421 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-368P-201ENST00000620928 107 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 RNU6-538P-201ENST00000622329 107 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
APOBEC1P41238 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
APOBEC1P41238 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
APOBEC1P41238 UGT2B26P-201ENST00000508672 1613 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
APOBEC1P41238 AC100757.1-201ENST00000616872 1835 ntBASIC4.93□□□□□ -1.62
APOBEC1P41238 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
APOBEC1P41238 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.92□□□□□ -1.62
APOBEC1P41238 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
APOBEC1P41238 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
APOBEC1P41238 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.92□□□□□ -1.62
APOBEC1P41238 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
APOBEC1P41238 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms