Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL132656.3-201ENST00000606384 1595 ntBASIC4.23□□□□□ -1.73
COL8A2P25067 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.22□□□□□ -1.73
COL8A2P25067 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.22□□□□□ -1.73
COL8A2P25067 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.22□□□□□ -1.73
COL8A2P25067 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.22□□□□□ -1.73
COL8A2P25067 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 SNORA70.10-201ENST00000384515 134 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 AL358178.1-201ENST00000407698 397 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 SNORA77-201ENST00000408716 125 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.22□□□□□ -1.73
COL8A2P25067 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.22□□□□□ -1.73
COL8A2P25067 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.22□□□□□ -1.73
COL8A2P25067 AC004980.3-201ENST00000447046 365 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 OR52J1P-201ENST00000450596 932 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.22□□□□□ -1.73
COL8A2P25067 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.22□□□□□ -1.73
COL8A2P25067 OR7H2P-201ENST00000513483 306 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 CDH12P4-201ENST00000517835 295 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 CDH12P3-201ENST00000517935 295 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 CDH12P1-201ENST00000518435 295 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.22□□□□□ -1.73
COL8A2P25067 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.22□□□□□ -1.73
COL8A2P25067 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 AC009117.1-201ENST00000563948 554 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 AC022884.2-201ENST00000578535 580 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 AP001521.2-201ENST00000608772 546 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 AC108359.1-201ENST00000616451 1211 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.22□□□□□ -1.73
COL8A2P25067 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 XKRY2-202ENST00000623874 1581 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 XKRY-202ENST00000624960 1581 ntBASIC4.22□□□□□ -1.73
COL8A2P25067 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL8A2P25067 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL8A2P25067 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COL8A2P25067 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL8A2P25067 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.21□□□□□ -1.73
COL8A2P25067 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL8A2P25067 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.21□□□□□ -1.73
COL8A2P25067 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 AC132825.1-201ENST00000463573 2247 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.21□□□□□ -1.74
COL8A2P25067 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
COL8A2P25067 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.21□□□□□ -1.74
COL8A2P25067 RPL7P11-201ENST00000437586 658 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC4.21□□□□□ -1.74
COL8A2P25067 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 AC012339.2-201ENST00000523996 453 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 MORF4L1P3-201ENST00000525966 950 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.21□□□□□ -1.74
COL8A2P25067 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 NDUFB4P11-201ENST00000560510 395 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC4.21□□□□□ -1.74
COL8A2P25067 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.21□□□□□ -1.74
COL8A2P25067 PRPF19P1-201ENST00000584766 898 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 EIF1P5-201ENST00000585002 234 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 AC005229.3-201ENST00000603438 323 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 AC087283.1-201ENST00000604029 1074 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 AC073342.3-201ENST00000624211 193 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 AC019072.1-201ENST00000604535 1551 ntBASIC4.21□□□□□ -1.74
COL8A2P25067 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
COL8A2P25067 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
COL8A2P25067 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL8A2P25067 SMG1P7-201ENST00000565246 2704 ntBASIC4.2□□□□□ -1.74
COL8A2P25067 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms