Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 VN1R110P-201ENST00000438988 971 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AL138899.2-201ENST00000439139 499 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AL589765.3-201ENST00000446084 462 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC002553.2-201ENST00000453217 340 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 NDUFA5P5-201ENST00000468361 342 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 RN7SL41P-201ENST00000476144 297 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 OARD1-211ENST00000480585 829 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 RN7SL817P-201ENST00000480777 288 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 NENFP3-201ENST00000503735 313 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC074087.1-201ENST00000512059 724 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 TRIM77BP-201ENST00000524985 1119 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 ATP5J2P6-201ENST00000565203 266 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC005341.1-201ENST00000571086 708 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC005726.4-201ENST00000582858 458 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC015802.2-201ENST00000589690 189 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC005252.1-201ENST00000604518 1063 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC107905.1-201ENST00000616204 426 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC118658.2-201ENST00000618697 459 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 MTCO1P1-201ENST00000624263 1081 ntBASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
HLA-DQA1P01909 AC245100.2-201ENST00000454544 1679 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 OR52B3P-201ENST00000314715 928 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 MIR375-201ENST00000362103 64 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 BMS1P3-201ENST00000372011 932 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SNORD96B-201ENST00000386148 79 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 HSPA8P15-201ENST00000401676 786 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 LAP3P1-201ENST00000403648 294 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AL139039.2-201ENST00000407436 479 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 VDAC1P9-201ENST00000412766 841 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 CASKP1-201ENST00000412870 582 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SLC35E1P1-201ENST00000419313 864 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 EIF4HP2-201ENST00000424380 563 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 HMGB3P24-201ENST00000433260 622 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 TMX2P1-201ENST00000436507 708 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 ARAFP2-201ENST00000440565 559 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AP006222.1-205ENST00000450734 457 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC108161.1-201ENST00000461060 402 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 RN7SL423P-201ENST00000486202 304 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC113430.1-201ENST00000506872 718 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC147055.1-201ENST00000509261 750 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 RNA5SP271-201ENST00000516700 88 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 SCARNA16.4-201ENST00000516956 187 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 NPM1P52-201ENST00000518264 846 ntBASIC3.81□□□□□ -1.8
HLA-DQA1P01909 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC3.81□□□□□ -1.8
HLA-DQA1P01909 NDUFA5P11-201ENST00000567995 343 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms