Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 FAM25E-202ENST00000608562 189 ntBASIC7.08□□□□□ -1.28
SIN3AQ96ST3 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 MTND5P12-201ENST00000502851 1449 ntBASIC7.08□□□□□ -1.28
SIN3AQ96ST3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
SIN3AQ96ST3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 OR5M12P-201ENST00000423388 929 ntBASIC7.07□□□□□ -1.28
SIN3AQ96ST3 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 AC008072.1-201ENST00000434254 824 ntBASIC7.07□□□□□ -1.28
SIN3AQ96ST3 PRPF38AP2-201ENST00000438179 851 ntBASIC7.07□□□□□ -1.28
SIN3AQ96ST3 AC011487.3-201ENST00000593607 453 ntBASIC7.07□□□□□ -1.28
SIN3AQ96ST3 AC019206.1-201ENST00000621938 425 ntBASIC7.07□□□□□ -1.28
SIN3AQ96ST3 AC091953.3-201ENST00000623220 236 ntBASIC7.07□□□□□ -1.28
SIN3AQ96ST3 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
SIN3AQ96ST3 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 RN7SKP149-201ENST00000363008 344 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 Z97832.1-201ENST00000402490 328 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AL021331.1-201ENST00000402817 582 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 RGS17P1-201ENST00000423358 553 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 OR6C71P-201ENST00000432580 913 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AURKAPS2-201ENST00000454983 333 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AC116562.1-201ENST00000485355 781 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AP001922.4-201ENST00000526967 290 ntBASIC7.06□□□□□ -1.28
SIN3AQ96ST3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.06□□□□□ -1.28
SIN3AQ96ST3 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AL672167.1-204ENST00000641875 3017 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 RSU1P3-201ENST00000412878 835 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AC234781.3-201ENST00000452540 973 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 RN7SL517P-201ENST00000462240 305 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AC090686.1-201ENST00000481577 749 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 CREM-238ENST00000488741 651 ntTSL 2 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AP006245.2-201ENST00000522004 300 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AP000676.2-201ENST00000529711 301 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 BRD9P1-201ENST00000529855 560 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 MIR3934-201ENST00000579806 107 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 PCA3_2.1-201ENST00000612507 409 ntBASIC7.05□□□□□ -1.28
SIN3AQ96ST3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC7.05□□□□□ -1.28
SIN3AQ96ST3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 TET1P1-201ENST00000426627 2301 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 RPL10P10-201ENST00000403509 664 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 RN7SL610P-201ENST00000463845 291 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 RN7SL558P-201ENST00000497468 299 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 ENPP7P9-201ENST00000514456 627 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 AL049830.4-201ENST00000555149 351 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC7.04□□□□□ -1.28
SIN3AQ96ST3 AC115989.2-201ENST00000578640 563 ntBASIC7.04□□□□□ -1.28
SIN3AQ96ST3 IGKV2OR2-2-201ENST00000605025 300 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms