Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 OR2A1-AS1-207ENST00000486094 819 ntBASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DRB4X5D2U9 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 HES2-206ENST00000489730 730 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 AC006557.6-201ENST00000623071 864 ntBASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DRB4X5D2U9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.67□□□□□ -0.06
HLA-DRB4X5D2U9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms