Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.8■□□□□ 0.76
RAI2Q9Y5P3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAI2Q9Y5P3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAI2Q9Y5P3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAI2Q9Y5P3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RAI2Q9Y5P3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAI2Q9Y5P3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RAI2Q9Y5P3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 AC004264.1-201ENST00000608354 794 ntBASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAI2Q9Y5P3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 KRT18P16-201ENST00000510337 1294 ntBASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAI2Q9Y5P3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RAI2Q9Y5P3 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 TUBB8P6-201ENST00000436895 1288 ntBASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAI2Q9Y5P3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 KRT16P5-201ENST00000455284 522 ntBASIC19.75■□□□□ 0.75
RAI2Q9Y5P3 BX088651.1-201ENST00000540551 451 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms