Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
HRH3Q9Y5N1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 PHGDH-210ENST00000641115 1638 ntBASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 AL121829.2-201ENST00000620908 328 ntBASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.03■□□□□ 0.48
HRH3Q9Y5N1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 AL121906.2-201ENST00000621597 723 ntBASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 AC113410.3-201ENST00000623366 203 ntBASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
HRH3Q9Y5N1 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.47
HRH3Q9Y5N1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HRH3Q9Y5N1 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
HRH3Q9Y5N1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HRH3Q9Y5N1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 TFP1-202ENST00000475455 1573 ntBASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HRH3Q9Y5N1 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18■□□□□ 0.47
HRH3Q9Y5N1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18■□□□□ 0.47
HRH3Q9Y5N1 BX088651.1-201ENST00000540551 451 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms