Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB13Q9Y5F0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB13Q9Y5F0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PCDHB13Q9Y5F0 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 PWWP2AP1-201ENST00000429776 2273 ntBASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 NBPF21P-201ENST00000425093 1451 ntBASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
PCDHB13Q9Y5F0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 ITM2C-210ENST00000620962 501 ntBASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 AL023875.1-201ENST00000640777 796 ntBASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.56■■□□□ 1.04
PCDHB13Q9Y5F0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 KRT18P16-201ENST00000510337 1294 ntBASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDHB13Q9Y5F0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 AIRN-201ENST00000601203 4374 ntBASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 KRT18P29-201ENST00000397031 1267 ntBASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 AC239809.2-201ENST00000415381 517 ntBASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 TUBB8P6-201ENST00000436895 1288 ntBASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDHB13Q9Y5F0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms