Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 FAM197Y4-202ENST00000622692 608 ntBASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHA4Q9UN74 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 C1QL1P1-201ENST00000568105 661 ntBASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHA4Q9UN74 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 AL158047.1-201ENST00000445918 881 ntBASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 TK2-204ENST00000525974 1178 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHA4Q9UN74 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
PCDHA4Q9UN74 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 SPIB-206ENST00000596074 847 ntTSL 2 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
PCDHA4Q9UN74 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
PCDHA4Q9UN74 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHA4Q9UN74 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.33■■□□□ 1.16
PCDHA4Q9UN74 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHA4Q9UN74 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC22.33■■□□□ 1.16
PCDHA4Q9UN74 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
PCDHA4Q9UN74 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC22.32■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms