Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.97■□□□□ 0.95
SIX4Q9UIU6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX4Q9UIU6 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SIX4Q9UIU6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.97■□□□□ 0.95
SIX4Q9UIU6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 FAM197Y1-201ENST00000421178 764 ntBASIC20.96■□□□□ 0.95
SIX4Q9UIU6 TSPY7P-201ENST00000431358 1114 ntBASIC20.96■□□□□ 0.95
SIX4Q9UIU6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SIX4Q9UIU6 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.95
SIX4Q9UIU6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
SIX4Q9UIU6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 KSR1P1-201ENST00000446298 240 ntBASIC20.95■□□□□ 0.94
SIX4Q9UIU6 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 CD177P1-201ENST00000606252 935 ntBASIC20.95■□□□□ 0.94
SIX4Q9UIU6 AL445675.2-201ENST00000620291 557 ntBASIC20.95■□□□□ 0.94
SIX4Q9UIU6 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SIX4Q9UIU6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 AP001412.1-201ENST00000608405 714 ntBASIC20.94■□□□□ 0.94
SIX4Q9UIU6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SIX4Q9UIU6 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 MIR4497-201ENST00000583208 89 ntBASIC20.93■□□□□ 0.94
SIX4Q9UIU6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SIX4Q9UIU6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 AL158211.5-201ENST00000623583 2518 ntBASIC20.92■□□□□ 0.94
SIX4Q9UIU6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SIX4Q9UIU6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms