Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 LTB4R2-202ENST00000528054 3092 ntBASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ABCF3Q9NUQ8 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 AL355472.2-201ENST00000422958 438 ntBASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 AC093787.1-201ENST00000450396 207 ntBASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
ABCF3Q9NUQ8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 AC090192.1-201ENST00000517740 490 ntBASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 AL050303.2-201ENST00000619798 666 ntBASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.8■□□□□ 0.76
ABCF3Q9NUQ8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 AC105036.2-201ENST00000569468 176 ntBASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 RAP2CP1-201ENST00000605103 478 ntBASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ABCF3Q9NUQ8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.78■□□□□ 0.76
ABCF3Q9NUQ8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms