Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TREX1Q9NSU2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TREX1Q9NSU2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
TREX1Q9NSU2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
TREX1Q9NSU2 KRT8P8-201ENST00000434750 1448 ntBASIC19.51■□□□□ 0.71
TREX1Q9NSU2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
TREX1Q9NSU2 AC098818.2-201ENST00000564925 2320 ntBASIC19.5■□□□□ 0.71
TREX1Q9NSU2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TREX1Q9NSU2 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 AC087289.5-201ENST00000586076 3175 ntBASIC19.48■□□□□ 0.71
TREX1Q9NSU2 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 AP000974.1-201ENST00000623909 2387 ntBASIC19.48■□□□□ 0.71
TREX1Q9NSU2 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TREX1Q9NSU2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 AC104417.2-201ENST00000562989 1793 ntBASIC19.47■□□□□ 0.71
TREX1Q9NSU2 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.47■□□□□ 0.71
TREX1Q9NSU2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.46■□□□□ 0.71
TREX1Q9NSU2 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.46■□□□□ 0.71
TREX1Q9NSU2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
TREX1Q9NSU2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
TREX1Q9NSU2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms