Protein–RNA interactions for Protein: Q9NRS6

SNX15, Sorting nexin-15, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX15Q9NRS6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SNX15Q9NRS6 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 TFP1-202ENST00000475455 1573 ntBASIC19.42■□□□□ 0.7
SNX15Q9NRS6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 AL050303.2-201ENST00000619798 666 ntBASIC19.42■□□□□ 0.7
SNX15Q9NRS6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SNX15Q9NRS6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 AC105036.2-201ENST00000569468 176 ntBASIC19.41■□□□□ 0.7
SNX15Q9NRS6 IKBKGP1-201ENST00000612193 1073 ntBASIC19.41■□□□□ 0.7
SNX15Q9NRS6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 AC073111.5-205ENST00000641717 521 ntBASIC19.41■□□□□ 0.7
SNX15Q9NRS6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.41■□□□□ 0.7
SNX15Q9NRS6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 BX276092.2-201ENST00000417668 665 ntBASIC19.4■□□□□ 0.7
SNX15Q9NRS6 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 AC080038.1-201ENST00000611274 1154 ntBASIC19.4■□□□□ 0.7
SNX15Q9NRS6 AC092437.1-201ENST00000624794 1048 ntBASIC19.4■□□□□ 0.7
SNX15Q9NRS6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SNX15Q9NRS6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX15Q9NRS6 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX15Q9NRS6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNX15Q9NRS6 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
SNX15Q9NRS6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.39■□□□□ 0.69
SNX15Q9NRS6 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms