Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TLR9Q9NR96 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TLR9Q9NR96 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.77■□□□□ 0.92
TLR9Q9NR96 AC092338.2-201ENST00000568827 1415 ntBASIC20.77■□□□□ 0.91
TLR9Q9NR96 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TLR9Q9NR96 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TLR9Q9NR96 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
TLR9Q9NR96 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 AC141257.4-201ENST00000634557 245 ntBASIC20.76■□□□□ 0.91
TLR9Q9NR96 AC136944.6-201ENST00000634818 245 ntBASIC20.76■□□□□ 0.91
TLR9Q9NR96 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 AP000550.4-202ENST00000639755 178 ntBASIC20.76■□□□□ 0.91
TLR9Q9NR96 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TLR9Q9NR96 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.76■□□□□ 0.91
TLR9Q9NR96 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.75■□□□□ 0.91
TLR9Q9NR96 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 Z85996.1-201ENST00000494644 937 ntBASIC20.75■□□□□ 0.91
TLR9Q9NR96 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.75■□□□□ 0.91
TLR9Q9NR96 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.75■□□□□ 0.91
TLR9Q9NR96 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.75■□□□□ 0.91
TLR9Q9NR96 TMEM179-206ENST00000616017 1645 ntBASIC20.75■□□□□ 0.91
TLR9Q9NR96 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TLR9Q9NR96 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TLR9Q9NR96 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TLR9Q9NR96 BID-203ENST00000399765 1879 ntTSL 2 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TLR9Q9NR96 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 TSPY17P-201ENST00000450329 467 ntBASIC20.74■□□□□ 0.91
TLR9Q9NR96 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TLR9Q9NR96 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.74■□□□□ 0.91
TLR9Q9NR96 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TLR9Q9NR96 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TLR9Q9NR96 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TLR9Q9NR96 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.73■□□□□ 0.91
TLR9Q9NR96 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.73■□□□□ 0.91
TLR9Q9NR96 KRT18P56-201ENST00000507275 550 ntBASIC20.73■□□□□ 0.91
TLR9Q9NR96 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 AL512604.3-201ENST00000569583 964 ntBASIC20.73■□□□□ 0.91
TLR9Q9NR96 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 AL023803.3-201ENST00000615559 522 ntBASIC20.73■□□□□ 0.91
TLR9Q9NR96 AC011558.1-201ENST00000623459 338 ntBASIC20.73■□□□□ 0.91
TLR9Q9NR96 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
TLR9Q9NR96 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TLR9Q9NR96 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TLR9Q9NR96 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TLR9Q9NR96 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TLR9Q9NR96 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TLR9Q9NR96 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TLR9Q9NR96 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TLR9Q9NR96 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.72■□□□□ 0.91
TLR9Q9NR96 AC009947.2-201ENST00000444014 672 ntBASIC20.72■□□□□ 0.91
TLR9Q9NR96 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TLR9Q9NR96 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.72■□□□□ 0.91
TLR9Q9NR96 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.72■□□□□ 0.91
TLR9Q9NR96 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms