Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 AL121832.2-201ENST00000610979 668 ntBASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 RNF165-205ENST00000588679 2904 ntBASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRTM1Q9HBL6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 DUSP5P2-201ENST00000426873 1033 ntBASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 AC090192.1-201ENST00000517740 490 ntBASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRTM1Q9HBL6 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRTM1Q9HBL6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
LRTM1Q9HBL6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
LRTM1Q9HBL6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRTM1Q9HBL6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRTM1Q9HBL6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 AC006970.2-201ENST00000450065 779 ntBASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 AC083906.2-201ENST00000511578 360 ntBASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
LRTM1Q9HBL6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 AC092118.2-201ENST00000613495 667 ntBASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.75■□□□□ 0.59
LRTM1Q9HBL6 AC004408.2-201ENST00000623613 2777 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms