Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
HIPK3Q9H422 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
HIPK3Q9H422 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.43■■□□□ 1.02
HIPK3Q9H422 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.43■■□□□ 1.02
HIPK3Q9H422 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK3Q9H422 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
HIPK3Q9H422 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
HIPK3Q9H422 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 AL023973.1-201ENST00000624619 620 ntBASIC21.42■■□□□ 1.02
HIPK3Q9H422 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.42■■□□□ 1.02
HIPK3Q9H422 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
HIPK3Q9H422 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.41■■□□□ 1.02
HIPK3Q9H422 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC21.41■■□□□ 1.02
HIPK3Q9H422 AL441883.1-201ENST00000566170 1045 ntBASIC21.41■■□□□ 1.02
HIPK3Q9H422 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
HIPK3Q9H422 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
HIPK3Q9H422 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.41■■□□□ 1.02
HIPK3Q9H422 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
HIPK3Q9H422 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 TMEM179-206ENST00000616017 1645 ntBASIC21.4■■□□□ 1.02
HIPK3Q9H422 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 AL450487.1-201ENST00000426799 995 ntBASIC21.4■■□□□ 1.02
HIPK3Q9H422 HCG4P8-203ENST00000443049 980 ntBASIC21.4■■□□□ 1.02
HIPK3Q9H422 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
HIPK3Q9H422 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.4■■□□□ 1.02
HIPK3Q9H422 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
HIPK3Q9H422 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
HIPK3Q9H422 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.39■■□□□ 1.02
HIPK3Q9H422 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK3Q9H422 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 AC005332.1-201ENST00000577698 1310 ntBASIC21.39■■□□□ 1.01
HIPK3Q9H422 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK3Q9H422 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK3Q9H422 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK3Q9H422 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK3Q9H422 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.39■■□□□ 1.01
HIPK3Q9H422 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
HIPK3Q9H422 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
HIPK3Q9H422 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIPK3Q9H422 AC092720.2-201ENST00000602388 1665 ntBASIC21.38■■□□□ 1.01
HIPK3Q9H422 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIPK3Q9H422 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
HIPK3Q9H422 AC026396.1-201ENST00000419388 421 ntBASIC21.38■■□□□ 1.01
HIPK3Q9H422 CA15P1-201ENST00000481698 905 ntBASIC21.38■■□□□ 1.01
HIPK3Q9H422 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.38■■□□□ 1.01
HIPK3Q9H422 KRT8P8-201ENST00000434750 1448 ntBASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms