Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 AC069152.1-201ENST00000438030 544 ntBASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 AC090192.1-201ENST00000517740 490 ntBASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 AC142086.2-201ENST00000569753 217 ntBASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC38A1Q9H2H9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 AC133041.1-202ENST00000642053 222 ntBASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SLC38A1Q9H2H9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A1Q9H2H9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.08■□□□□ 0.49
SLC38A1Q9H2H9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A1Q9H2H9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A1Q9H2H9 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A1Q9H2H9 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SLC38A1Q9H2H9 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 AL121906.2-201ENST00000621597 723 ntBASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SLC38A1Q9H2H9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 AC120498.8-201ENST00000614275 531 ntBASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SLC38A1Q9H2H9 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A1Q9H2H9 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.06■□□□□ 0.48
SLC38A1Q9H2H9 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SLC38A1Q9H2H9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.06■□□□□ 0.48
SLC38A1Q9H2H9 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms