Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 DECR2-212ENST00000627716 352 ntTSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDT1Q9H211 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDT1Q9H211 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CDT1Q9H211 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.22■□□□□ 0.99
CDT1Q9H211 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.22■□□□□ 0.99
CDT1Q9H211 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CDT1Q9H211 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 PCDHAC2-203ENST00000615316 3011 ntBASIC21.21■□□□□ 0.99
CDT1Q9H211 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.21■□□□□ 0.99
CDT1Q9H211 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.21■□□□□ 0.99
CDT1Q9H211 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.21■□□□□ 0.99
CDT1Q9H211 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.21■□□□□ 0.99
CDT1Q9H211 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.21■□□□□ 0.99
CDT1Q9H211 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CDT1Q9H211 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CDT1Q9H211 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.2■□□□□ 0.98
CDT1Q9H211 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
CDT1Q9H211 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.2■□□□□ 0.98
CDT1Q9H211 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CDT1Q9H211 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC21.2■□□□□ 0.98
CDT1Q9H211 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.2■□□□□ 0.98
CDT1Q9H211 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 AL031985.4-201ENST00000642138 673 ntBASIC21.2■□□□□ 0.98
CDT1Q9H211 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.2■□□□□ 0.98
CDT1Q9H211 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
CDT1Q9H211 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CDT1Q9H211 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.19■□□□□ 0.98
CDT1Q9H211 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.19■□□□□ 0.98
CDT1Q9H211 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC21.19■□□□□ 0.98
CDT1Q9H211 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.19■□□□□ 0.98
CDT1Q9H211 MESTP1-201ENST00000404287 994 ntBASIC21.19■□□□□ 0.98
CDT1Q9H211 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.19■□□□□ 0.98
CDT1Q9H211 AC116562.2-201ENST00000507042 360 ntBASIC21.19■□□□□ 0.98
CDT1Q9H211 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 BX088651.1-201ENST00000540551 451 ntBASIC21.19■□□□□ 0.98
CDT1Q9H211 AC026271.3-201ENST00000571884 352 ntBASIC21.19■□□□□ 0.98
CDT1Q9H211 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.19■□□□□ 0.98
CDT1Q9H211 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.19■□□□□ 0.98
CDT1Q9H211 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC21.19■□□□□ 0.98
CDT1Q9H211 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.19■□□□□ 0.98
CDT1Q9H211 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDT1Q9H211 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CDT1Q9H211 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.18■□□□□ 0.98
CDT1Q9H211 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.18■□□□□ 0.98
CDT1Q9H211 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.18■□□□□ 0.98
CDT1Q9H211 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDT1Q9H211 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.18■□□□□ 0.98
CDT1Q9H211 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.18■□□□□ 0.98
CDT1Q9H211 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CDT1Q9H211 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.18■□□□□ 0.98
CDT1Q9H211 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.18■□□□□ 0.98
CDT1Q9H211 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDT1Q9H211 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDT1Q9H211 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CDT1Q9H211 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 RBM17P1-201ENST00000453646 1190 ntBASIC21.17■□□□□ 0.98
CDT1Q9H211 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.17■□□□□ 0.98
CDT1Q9H211 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.17■□□□□ 0.98
CDT1Q9H211 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDT1Q9H211 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms