Protein–RNA interactions for Protein: Q9C0H6

KLHL4, Kelch-like protein 4, humanhuman

Predictions only

Length 718 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL4Q9C0H6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 KRT18P11-201ENST00000435214 1283 ntBASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
KLHL4Q9C0H6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 KRT16P2-201ENST00000414673 1423 ntBASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 AP000997.3-201ENST00000623333 2250 ntBASIC18.8■□□□□ 0.6
KLHL4Q9C0H6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 AL133373.2-201ENST00000623187 2828 ntBASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 AC073111.5-205ENST00000641717 521 ntBASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 DPP3P2-201ENST00000416030 1696 ntBASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 AIRN-201ENST00000601203 4374 ntBASIC18.79■□□□□ 0.6
KLHL4Q9C0H6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 AC011767.1-201ENST00000617410 1153 ntBASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KLHL4Q9C0H6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC18.77■□□□□ 0.6
KLHL4Q9C0H6 CDCA4P2-201ENST00000441182 718 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms