Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDCA4Q9BXL8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 NOC2LP1-202ENST00000452600 2235 ntBASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 CYP21A1P-202ENST00000354927 1481 ntBASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 YBX1P1-201ENST00000445822 960 ntBASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CDCA4Q9BXL8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 AL133373.2-201ENST00000623187 2828 ntBASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 AC018470.1-201ENST00000624790 3129 ntBASIC17.52■□□□□ 0.39
CDCA4Q9BXL8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CDCA4Q9BXL8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 MIR6084-201ENST00000622012 110 ntBASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.5■□□□□ 0.39
CDCA4Q9BXL8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CDCA4Q9BXL8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms