Protein–RNA interactions for Protein: Q9BQY4

RHOXF2, Rhox homeobox family member 2, humanhuman

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF2Q9BQY4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF2Q9BQY4 PTBP1P-201ENST00000554374 1601 ntBASIC20.56■□□□□ 0.88
RHOXF2Q9BQY4 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.56■□□□□ 0.88
RHOXF2Q9BQY4 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.56■□□□□ 0.88
RHOXF2Q9BQY4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RHOXF2Q9BQY4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
RHOXF2Q9BQY4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 AC105265.2-201ENST00000467189 838 ntBASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RHOXF2Q9BQY4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
RHOXF2Q9BQY4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 KRT8P17-201ENST00000453110 1448 ntBASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 KRT16P6-202ENST00000425692 1426 ntBASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 RBM17P2-201ENST00000616397 1405 ntBASIC20.53■□□□□ 0.88
RHOXF2Q9BQY4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L2-201ENST00000561772 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L6-201ENST00000626483 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L1-201ENST00000627662 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L8-201ENST00000629013 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L3-201ENST00000630187 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L7-201ENST00000630678 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 DUX4L5-201ENST00000630834 1275 ntBASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RHOXF2Q9BQY4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms