Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
S1PR3Q99500 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
S1PR3Q99500 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
S1PR3Q99500 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
S1PR3Q99500 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
S1PR3Q99500 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC16.12■□□□□ 0.17
S1PR3Q99500 AC020763.4-201ENST00000623414 4170 ntBASIC16.12■□□□□ 0.17
S1PR3Q99500 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.11■□□□□ 0.17
S1PR3Q99500 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
S1PR3Q99500 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 AC069152.1-201ENST00000438030 544 ntBASIC16.11■□□□□ 0.17
S1PR3Q99500 AC097658.1-201ENST00000475555 843 ntBASIC16.11■□□□□ 0.17
S1PR3Q99500 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.11■□□□□ 0.17
S1PR3Q99500 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.11■□□□□ 0.17
S1PR3Q99500 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.11■□□□□ 0.17
S1PR3Q99500 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
S1PR3Q99500 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
S1PR3Q99500 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.1■□□□□ 0.17
S1PR3Q99500 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
S1PR3Q99500 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
S1PR3Q99500 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.1■□□□□ 0.17
S1PR3Q99500 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.1■□□□□ 0.17
S1PR3Q99500 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.1■□□□□ 0.17
S1PR3Q99500 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC16.1■□□□□ 0.17
S1PR3Q99500 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.1■□□□□ 0.17
S1PR3Q99500 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.1■□□□□ 0.17
S1PR3Q99500 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.1■□□□□ 0.17
S1PR3Q99500 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
S1PR3Q99500 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
S1PR3Q99500 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.09■□□□□ 0.17
S1PR3Q99500 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.09■□□□□ 0.17
S1PR3Q99500 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
S1PR3Q99500 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.09■□□□□ 0.17
S1PR3Q99500 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
S1PR3Q99500 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.09■□□□□ 0.17
S1PR3Q99500 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.09■□□□□ 0.17
S1PR3Q99500 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.09■□□□□ 0.17
S1PR3Q99500 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 AC098934.4-201ENST00000564127 592 ntBASIC16.09■□□□□ 0.17
S1PR3Q99500 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.09■□□□□ 0.17
S1PR3Q99500 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.09■□□□□ 0.17
S1PR3Q99500 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
S1PR3Q99500 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms