Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 AC005829.2-201ENST00000571422 1056 ntBASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 AL109923.1-201ENST00000618799 583 ntBASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HIST1H2AAQ96QV6 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.92■□□□□ 0.3
HIST1H2AAQ96QV6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 AL138781.1-201ENST00000566567 1274 ntBASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.91■□□□□ 0.3
HIST1H2AAQ96QV6 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.9■□□□□ 0.3
HIST1H2AAQ96QV6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms